Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80421352-80531455

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcf3 10 80409514 to 80433647 24133 - protein coding gene transcription factor 3
Tssr98457 10 80421847 to 80421876 29 - TSS region transcription start site region 98457
Cpgi1881 10 80432812 to 80434253 1441 CpG island CpG island 1881
Tssr98458 10 80433384 to 80433418 34 - TSS region transcription start site region 98458
Tssr98459 10 80433583 to 80433594 11 - TSS region transcription start site region 98459
Tssr98460 10 80433602 to 80433613 11 - TSS region transcription start site region 98460
Tssr98461 10 80433615 to 80433655 40 - TSS region transcription start site region 98461
Tssr98462 10 80433945 to 80434001 56 - TSS region transcription start site region 98462
Cpgi1882 10 80446277 to 80446724 447 CpG island CpG island 1882
D10Mit21 10 80470562 to 80470690 128 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 21
Gm40716 10 80471409 to 80475380 3971 - lncRNA gene predicted gene, 40716
Cpgi1883 10 80471673 to 80472214 541 CpG island CpG island 1883
Cpgi1884 10 80474868 to 80475962 1094 CpG island CpG island 1884
Gm25044 10 80476352 to 80476455 103 + snRNA gene predicted gene, 25044
Cpgi1885 10 80490140 to 80491718 1578 CpG island CpG island 1885
Cpgi1886 10 80494514 to 80496796 2282 CpG island CpG island 1886
Tssr94572 10 80494855 to 80494873 18 + TSS region transcription start site region 94572
Onecut3 10 80494906 to 80517266 22360 + protein coding gene one cut domain, family member 3
Cpgi1887 10 80502888 to 80503107 219 CpG island CpG island 1887
Cpgi1888 10 80503529 to 80503798 269 CpG island CpG island 1888
2610034O05Rik 10 80508769 to 80509623 854 + unclassified gene RIKEN cDNA 2610034O05 gene
Cpgi1889 10 80513890 to 80514200 310 CpG island CpG island 1889
Atp8b3 10 80519584 to 80539124 19540 - protein coding gene ATPase, class I, type 8B, member 3
Tssr98463 10 80520271 to 80520286 15 - TSS region transcription start site region 98463
Tssr98464 10 80522106 to 80522110 4 - TSS region transcription start site region 98464
Cpgi1890 10 80526641 to 80526888 247 CpG island CpG island 1890