Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80356265-80418497

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1875 10 80355873 to 80357250 1377 CpG island CpG island 1875
Plk5 10 80356459 to 80365489 9030 + protein coding gene polo like kinase 5
Tssr94568 10 80356480 to 80356494 14 + TSS region transcription start site region 94568
Cpgi1876 10 80357805 to 80358445 640 CpG island CpG island 1876
Gm15123 10 80371898 to 80372432 534 + antisense lncRNA gene predicted gene 15123
Gm15124 10 80371955 to 80373216 1261 + antisense lncRNA gene predicted gene 15124
Gm47793 10 80377167 to 80377552 385 - pseudogene predicted gene, 47793
Mex3d 10 80380355 to 80387651 7296 - protein coding gene mex3 RNA binding family member D
Gm22721 10 80382302 to 80382384 82 + miRNA gene predicted gene, 22721
Cpgi1877 10 80386265 to 80388497 2232 CpG island CpG island 1877
Tssr98439 10 80387586 to 80387630 44 - TSS region transcription start site region 98439
Tssr98440 10 80387642 to 80387666 24 - TSS region transcription start site region 98440
Gm30823 10 80387760 to 80395067 7307 + lncRNA gene predicted gene, 30823
Mbd3 10 80392539 to 80399531 6992 - protein coding gene methyl-CpG binding domain protein 3
Tssr98441 10 80395357 to 80395405 48 - TSS region transcription start site region 98441
Tssr98442 10 80398273 to 80398277 4 - TSS region transcription start site region 98442
Cpgi1878 10 80398621 to 80400233 1612 CpG island CpG island 1878
Tssr94569 10 80398966 to 80399035 69 + TSS region transcription start site region 94569
Tssr94570 10 80399037 to 80399049 12 + TSS region transcription start site region 94570
Tssr98443 10 80399344 to 80399384 40 - TSS region transcription start site region 98443
Tssr98444 10 80399389 to 80399428 39 - TSS region transcription start site region 98444
Tssr98445 10 80399430 to 80399476 46 - TSS region transcription start site region 98445
Tssr98446 10 80399478 to 80399516 38 - TSS region transcription start site region 98446
Tssr98447 10 80399532 to 80399547 15 - TSS region transcription start site region 98447
Tssr98448 10 80399552 to 80399563 11 - TSS region transcription start site region 98448
Tssr94571 10 80399822 to 80399848 26 + TSS region transcription start site region 94571
3300002P09Rik 10 80400644 to 80401674 1030 unclassified gene RIKEN cDNA 3300002P09 gene
Uqcr11 10 80402997 to 80406821 3824 - protein coding gene ubiquinol-cytochrome c reductase, complex III subunit XI
Cpgi1879 10 80406239 to 80407027 788 CpG island CpG island 1879
Tssr98449 10 80406792 to 80406809 17 - TSS region transcription start site region 98449
Tssr98450 10 80406811 to 80406819 8 - TSS region transcription start site region 98450
Tcf3 10 80409514 to 80433647 24133 - protein coding gene transcription factor 3
Cpgi1880 10 80412582 to 80413338 756 CpG island CpG island 1880
Tssr98451 10 80412708 to 80412720 12 - TSS region transcription start site region 98451
D10Mit23 10 80414634 to 80414737 103 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 23
Tssr98452 10 80416632 to 80416645 13 - TSS region transcription start site region 98452
Tssr98453 10 80417386 to 80417418 32 - TSS region transcription start site region 98453
Tssr98454 10 80417480 to 80417485 5 - TSS region transcription start site region 98454