Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 10:80321955-80423216

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86 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcsk4 10 80321283 to 80329498 8215 - protein coding gene proprotein convertase subtilisin/kexin type 4
Cpgi1871 10 80322780 to 80324023 1243 CpG island CpG island 1871
Tssr98422 10 80323036 to 80323046 10 - TSS region transcription start site region 98422
Tssr98423 10 80323064 to 80323088 24 - TSS region transcription start site region 98423
Tssr98424 10 80323121 to 80323133 12 - TSS region transcription start site region 98424
Tssr98425 10 80323379 to 80323428 49 - TSS region transcription start site region 98425
Tssr94549 10 80323503 to 80323521 18 + TSS region transcription start site region 94549
Tssr98426 10 80323756 to 80323795 39 - TSS region transcription start site region 98426
Tssr98427 10 80329404 to 80329421 17 - TSS region transcription start site region 98427
Tssr98428 10 80329426 to 80329482 56 - TSS region transcription start site region 98428
Tssr94550 10 80329502 to 80329508 6 + TSS region transcription start site region 94550
Tssr98429 10 80329515 to 80329530 15 - TSS region transcription start site region 98429
Tssr94551 10 80329543 to 80329555 12 + TSS region transcription start site region 94551
Cpgi1872 10 80329612 to 80330714 1102 CpG island CpG island 1872
Tssr94552 10 80329961 to 80329987 26 + TSS region transcription start site region 94552
Tssr94553 10 80329988 to 80330009 21 + TSS region transcription start site region 94553
Reep6 10 80329997 to 80336441 6444 + protein coding gene receptor accessory protein 6
Tssr3278 10 80330112 to 80330119 7 + TSS region transcription start site region 3278
Tssr94554 10 80330127 to 80330211 84 + TSS region transcription start site region 94554
Tssr94555 10 80330297 to 80330310 13 + TSS region transcription start site region 94555
Gm51809 10 80330459 to 80333185 2726 - lincRNA gene predicted gene, 51809
Tssr94556 10 80334004 to 80334018 14 + TSS region transcription start site region 94556
Tssr94557 10 80334729 to 80334746 17 + TSS region transcription start site region 94557
Tssr94558 10 80335102 to 80335115 13 + TSS region transcription start site region 94558
Tssr94559 10 80335156 to 80335179 23 + TSS region transcription start site region 94559
Tssr94560 10 80335181 to 80335283 102 + TSS region transcription start site region 94560
Tssr98430 10 80335334 to 80335370 36 - TSS region transcription start site region 98430
Tssr94561 10 80335498 to 80335509 11 + TSS region transcription start site region 94561
Tssr94562 10 80335921 to 80335939 18 + TSS region transcription start site region 94562
Tssr94563 10 80335942 to 80335958 16 + TSS region transcription start site region 94563
Tssr94564 10 80336020 to 80336031 11 + TSS region transcription start site region 94564
Tssr94565 10 80336062 to 80336093 31 + TSS region transcription start site region 94565
Tssr94566 10 80336109 to 80336122 13 + TSS region transcription start site region 94566
Tssr94567 10 80336141 to 80336162 21 + TSS region transcription start site region 94567
Tssr98431 10 80336361 to 80336372 11 - TSS region transcription start site region 98431
Adamtsl5 10 80339793 to 80349030 9237 - protein coding gene ADAMTS-like 5
Cpgi1873 10 80341191 to 80343148 1957 CpG island CpG island 1873
Tssr98432 10 80345214 to 80345260 46 - TSS region transcription start site region 98432
Cpgi1874 10 80348045 to 80349419 1374 CpG island CpG island 1874
Tssr98433 10 80348357 to 80348367 10 - TSS region transcription start site region 98433
Tssr98434 10 80348405 to 80348418 13 - TSS region transcription start site region 98434
Tssr98435 10 80348432 to 80348458 26 - TSS region transcription start site region 98435
Tssr98436 10 80348587 to 80348611 24 - TSS region transcription start site region 98436
Tssr98437 10 80348617 to 80348663 46 - TSS region transcription start site region 98437
Tssr98438 10 80348999 to 80349031 32 - TSS region transcription start site region 98438
Cpgi1875 10 80355873 to 80357250 1377 CpG island CpG island 1875
Plk5 10 80356459 to 80365489 9030 + protein coding gene polo like kinase 5
Tssr94568 10 80356480 to 80356494 14 + TSS region transcription start site region 94568
Cpgi1876 10 80357805 to 80358445 640 CpG island CpG island 1876
Gm15123 10 80371898 to 80372432 534 + lncRNA gene predicted gene 15123
Gm15124 10 80371955 to 80373216 1261 + lncRNA gene predicted gene 15124
Gm47793 10 80377167 to 80377552 385 - pseudogene predicted gene, 47793
Mex3d 10 80380355 to 80387651 7296 - protein coding gene mex3 RNA binding family member D
Gm22721 10 80382302 to 80382384 82 + miRNA gene predicted gene, 22721
Cpgi1877 10 80386265 to 80388497 2232 CpG island CpG island 1877
Tssr98439 10 80387586 to 80387630 44 - TSS region transcription start site region 98439
Tssr98440 10 80387642 to 80387666 24 - TSS region transcription start site region 98440
Gm30823 10 80387760 to 80395068 7308 + lncRNA gene predicted gene, 30823
Mbd3 10 80392539 to 80399531 6992 - protein coding gene methyl-CpG binding domain protein 3
Tssr98441 10 80395357 to 80395405 48 - TSS region transcription start site region 98441
Tssr98442 10 80398273 to 80398277 4 - TSS region transcription start site region 98442
Cpgi1878 10 80398621 to 80400233 1612 CpG island CpG island 1878
Tssr94569 10 80398966 to 80399035 69 + TSS region transcription start site region 94569
Tssr94570 10 80399037 to 80399049 12 + TSS region transcription start site region 94570
Tssr98443 10 80399344 to 80399384 40 - TSS region transcription start site region 98443
Tssr98444 10 80399389 to 80399428 39 - TSS region transcription start site region 98444
Tssr98445 10 80399430 to 80399476 46 - TSS region transcription start site region 98445
Tssr98446 10 80399478 to 80399516 38 - TSS region transcription start site region 98446
Tssr98447 10 80399532 to 80399547 15 - TSS region transcription start site region 98447
Tssr98448 10 80399552 to 80399563 11 - TSS region transcription start site region 98448
Tssr94571 10 80399822 to 80399848 26 + TSS region transcription start site region 94571
3300002P09Rik 10 80400644 to 80401674 1030 lncRNA gene RIKEN cDNA 3300002P09 gene
Uqcr11 10 80402997 to 80406821 3824 - protein coding gene ubiquinol-cytochrome c reductase, complex III subunit XI
Cpgi1879 10 80406239 to 80407027 788 CpG island CpG island 1879
Tssr98449 10 80406792 to 80406809 17 - TSS region transcription start site region 98449
Tssr98450 10 80406811 to 80406819 8 - TSS region transcription start site region 98450
Tcf3 10 80409514 to 80433647 24133 - protein coding gene transcription factor 3
Cpgi1880 10 80412582 to 80413338 756 CpG island CpG island 1880
Tssr98451 10 80412708 to 80412720 12 - TSS region transcription start site region 98451
D10Mit23 10 80414634 to 80414737 103 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 23
Tssr98452 10 80416632 to 80416645 13 - TSS region transcription start site region 98452
Tssr98453 10 80417386 to 80417418 32 - TSS region transcription start site region 98453
Tssr98454 10 80417480 to 80417485 5 - TSS region transcription start site region 98454
Tssr98455 10 80419551 to 80419562 11 - TSS region transcription start site region 98455
Tssr98456 10 80419683 to 80419700 17 - TSS region transcription start site region 98456
Tssr98457 10 80421847 to 80421876 29 - TSS region transcription start site region 98457