Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:80116643-80257042

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1843 10 80114752 to 80117473 2721 CpG island CpG island 1843
Stk11 10 80115803 to 80130682 14879 + protein coding gene serine/threonine kinase 11
Tssr98400 10 80117115 to 80117126 11 - TSS region transcription start site region 98400
Tssr94485 10 80117295 to 80117311 16 + TSS region transcription start site region 94485
Tssr98401 10 80117986 to 80117990 4 - TSS region transcription start site region 98401
Tssr98402 10 80121754 to 80121767 13 - TSS region transcription start site region 98402
Tssr98403 10 80121795 to 80121802 7 - TSS region transcription start site region 98403
Tssr94486 10 80121939 to 80121950 11 + TSS region transcription start site region 94486
Cbarp 10 80130434 to 80140135 9701 - protein coding gene calcium channel, voltage-dependent, beta subunit associated regulatory protein
Cpgi1844 10 80131223 to 80132230 1007 CpG island CpG island 1844
Cpgi1845 10 80136368 to 80136726 358 CpG island CpG island 1845
Tssr98404 10 80136471 to 80136484 13 - TSS region transcription start site region 98404
Cpgi1846 10 80136973 to 80137505 532 CpG island CpG island 1846
Tssr98405 10 80137151 to 80137184 33 - TSS region transcription start site region 98405
Tssr98406 10 80137376 to 80137443 67 - TSS region transcription start site region 98406
Cpgi1847 10 80138274 to 80139808 1534 CpG island CpG island 1847
Atp5d 10 80138768 to 80145818 7050 + protein coding gene ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
Tssr98407 10 80139159 to 80139172 13 - TSS region transcription start site region 98407
Tssr98408 10 80139189 to 80139204 15 - TSS region transcription start site region 98408
Tssr98409 10 80139347 to 80139370 23 - TSS region transcription start site region 98409
Cpgi1848 10 80141239 to 80141695 456 CpG island CpG island 1848
Tssr98410 10 80141310 to 80141322 12 - TSS region transcription start site region 98410
Tssr98411 10 80141362 to 80141382 20 - TSS region transcription start site region 98411
Tssr94487 10 80141553 to 80141575 22 + TSS region transcription start site region 94487
Cpgi1849 10 80142162 to 80142698 536 CpG island CpG island 1849
Tssr94488 10 80142279 to 80142290 11 + TSS region transcription start site region 94488
Tssr94489 10 80142295 to 80142311 16 + TSS region transcription start site region 94489
Tssr94490 10 80142334 to 80142353 19 + TSS region transcription start site region 94490
Tssr94491 10 80142358 to 80142404 46 + TSS region transcription start site region 94491
Tssr94492 10 80142409 to 80142423 14 + TSS region transcription start site region 94492
Tssr94493 10 80142521 to 80142526 5 + TSS region transcription start site region 94493
Tssr94494 10 80142539 to 80142544 5 + TSS region transcription start site region 94494
Tssr94495 10 80145415 to 80145465 50 + TSS region transcription start site region 94495
Tssr94496 10 80147846 to 80147855 9 + TSS region transcription start site region 94496
Cpgi1850 10 80147938 to 80151490 3552 CpG island CpG island 1850
Tssr94497 10 80148248 to 80148253 5 + TSS region transcription start site region 94497
Tssr94498 10 80148263 to 80148279 16 + TSS region transcription start site region 94498
Midn 10 80148272 to 80158368 10096 + protein coding gene midnolin
Tssr94499 10 80149658 to 80149685 27 + TSS region transcription start site region 94499
Tssr94500 10 80150448 to 80150482 34 + TSS region transcription start site region 94500
Tssr94501 10 80150485 to 80150513 28 + TSS region transcription start site region 94501
Tssr94502 10 80150812 to 80150825 13 + TSS region transcription start site region 94502
Tssr94503 10 80150952 to 80150979 27 + TSS region transcription start site region 94503
Tssr94504 10 80150983 to 80151000 17 + TSS region transcription start site region 94504
Tssr94505 10 80151326 to 80151375 49 + TSS region transcription start site region 94505
Tssr94506 10 80152411 to 80152448 37 + TSS region transcription start site region 94506
Tssr94507 10 80154010 to 80154086 76 + TSS region transcription start site region 94507
Tssr94508 10 80156728 to 80156763 35 + TSS region transcription start site region 94508
Tssr94509 10 80156862 to 80156876 14 + TSS region transcription start site region 94509
Tssr94510 10 80157949 to 80157957 8 + TSS region transcription start site region 94510
Tssr94511 10 80158038 to 80158060 22 + TSS region transcription start site region 94511
Tssr94512 10 80158125 to 80158129 4 + TSS region transcription start site region 94512
Tssr94513 10 80158745 to 80158773 28 + TSS region transcription start site region 94513
Cpgi1851 10 80159615 to 80160400 785 CpG island CpG island 1851
Tssr98412 10 80159706 to 80159719 13 - TSS region transcription start site region 98412
Tssr98413 10 80160907 to 80160921 14 - TSS region transcription start site region 98413
Cpgi1852 10 80161119 to 80161422 303 CpG island CpG island 1852
Cpgi1853 10 80164489 to 80165327 838 CpG island CpG island 1853
Tssr98414 10 80165069 to 80165108 39 - TSS region transcription start site region 98414
Cirbp 10 80165990 to 80172691 6701 + protein coding gene cold inducible RNA binding protein
Cpgi1854 10 80167451 to 80168549 1098 CpG island CpG island 1854
Tssr94514 10 80167837 to 80167840 3 + TSS region transcription start site region 94514
Tssr94515 10 80168169 to 80168172 3 + TSS region transcription start site region 94515
Tssr94516 10 80169721 to 80169725 4 + TSS region transcription start site region 94516
Tssr94517 10 80171346 to 80171352 6 + TSS region transcription start site region 94517
Cpgi1855 10 80172829 to 80173446 617 CpG island CpG island 1855
Tssr94518 10 80172934 to 80172961 27 + TSS region transcription start site region 94518
1600002K03Rik 10 80172944 to 80175119 2175 + protein coding gene RIKEN cDNA 1600002K03 gene
Cpgi1856 10 80178845 to 80180628 1783 CpG island CpG island 1856
Tssr94519 10 80179431 to 80179464 33 + TSS region transcription start site region 94519
Efna2 10 80179482 to 80190010 10528 + protein coding gene ephrin A2
Tssr94520 10 80179493 to 80179531 38 + TSS region transcription start site region 94520
Tssr94521 10 80179688 to 80179755 67 + TSS region transcription start site region 94521
Cpgi1857 10 80186643 to 80187042 399 CpG island CpG island 1857
Cpgi1858 10 80190049 to 80191303 1254 CpG island CpG island 1858
Cpgi1859 10 80208854 to 80209141 287 CpG island CpG island 1859
Cpgi1860 10 80226196 to 80227117 921 CpG island CpG island 1860
Pwwp3a 10 80226434 to 80243903 17469 + protein coding gene PWWP domain containing 3A, DNA repair factor
Tssr94522 10 80226644 to 80226752 108 + TSS region transcription start site region 94522
Tssr94523 10 80226755 to 80226762 7 + TSS region transcription start site region 94523
Tssr94524 10 80226765 to 80226783 18 + TSS region transcription start site region 94524
Tssr94525 10 80226792 to 80226799 7 + TSS region transcription start site region 94525
Tssr3277 10 80228322 to 80228352 30 + TSS region transcription start site region 3277
D10Mit226 10 80247709 to 80247802 93 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 226
Cpgi1861 10 80248954 to 80249745 791 CpG island CpG island 1861
n-TFgaa3 10 80248964 to 80249036 72 - tRNA gene nuclear encoded tRNA pheylalanine 3 (anticodon GAA)
Tssr94526 10 80249106 to 80249124 18 + TSS region transcription start site region 94526
Ndufs7 10 80249121 to 80256793 7672 + protein coding gene NADH:ubiquinone oxidoreductase core subunit S7
Tssr94527 10 80249131 to 80249154 23 + TSS region transcription start site region 94527
n-TNgtt7 10 80249159 to 80249232 73 + tRNA gene nuclear encoded tRNA asparagine 7 (anticodon GTT)
Tssr94528 10 80249441 to 80249468 27 + TSS region transcription start site region 94528
Tssr94529 10 80253684 to 80253720 36 + TSS region transcription start site region 94529