Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79929656-80039659

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arid3a 10 79927043 to 79955018 27975 + protein coding gene AT rich interactive domain 3A (BRIGHT-like)
Tssr94435 10 79930394 to 79930409 15 + TSS region transcription start site region 94435
Tssr94436 10 79930419 to 79930428 9 + TSS region transcription start site region 94436
Cpgi1825 10 79936950 to 79937586 636 CpG island CpG island 1825
Tssr94437 10 79946273 to 79946296 23 + TSS region transcription start site region 94437
Tssr94438 10 79948975 to 79949003 28 + TSS region transcription start site region 94438
Tssr94439 10 79952299 to 79952316 17 + TSS region transcription start site region 94439
Tssr94440 10 79952406 to 79952413 7 + TSS region transcription start site region 94440
Tssr94441 10 79954401 to 79954445 44 + TSS region transcription start site region 94441
Cpgi1826 10 79958252 to 79958550 298 CpG island CpG island 1826
Cpgi1827 10 79959830 to 79960800 970 CpG island CpG island 1827
Wdr18 10 79959989 to 79969247 9258 + protein coding gene WD repeat domain 18
Tssr94442 10 79960145 to 79960162 17 + TSS region transcription start site region 94442
Tssr98370 10 79961319 to 79961342 23 - TSS region transcription start site region 98370
D10Jhu78 10 79966796 to 79966978 182 DNA segment DNA segment, Chr 10, Johns Hopkins University 78
Tssr94443 10 79967304 to 79967343 39 + TSS region transcription start site region 94443
Cpgi1828 10 79970647 to 79971723 1076 CpG island CpG island 1828
Grin3b 10 79970715 to 79977190 6475 + protein coding gene glutamate receptor, ionotropic, NMDA3B
Cpgi1829 10 79975578 to 79977763 2185 CpG island CpG island 1829
Tmem259 10 79977120 to 79984330 7210 - protein coding gene transmembrane protein 259
Cpgi1830 10 79983614 to 79985254 1640 CpG island CpG island 1830
Tssr98371 10 79983970 to 79984016 46 - TSS region transcription start site region 98371
Tssr98372 10 79984227 to 79984319 92 - TSS region transcription start site region 98372
Tssr3276 10 79984656 to 79984659 3 + TSS region transcription start site region 3276
Gm26243 10 79985506 to 79985612 106 + snRNA gene predicted gene, 26243
Cpgi1831 10 79985700 to 79985896 196 CpG island CpG island 1831
Cpgi1832 10 79988360 to 79989329 969 CpG island CpG island 1832
Tssr94444 10 79988589 to 79988683 94 + TSS region transcription start site region 94444
Cnn2 10 79988600 to 79995400 6800 + protein coding gene calponin 2
Cpgi1833 10 79990894 to 79991334 440 CpG island CpG island 1833
Tssr94445 10 79991574 to 79991583 9 + TSS region transcription start site region 94445
Tssr94446 10 79994845 to 79994858 13 + TSS region transcription start site region 94446
Tssr94447 10 79995018 to 79995035 17 + TSS region transcription start site region 94447
Tssr94448 10 79995078 to 79995090 12 + TSS region transcription start site region 94448
Tssr94449 10 79995258 to 79995302 44 + TSS region transcription start site region 94449
Tssr98373 10 79995319 to 79995348 29 - TSS region transcription start site region 98373
Tssr98374 10 79995383 to 79995402 19 - TSS region transcription start site region 98374
Cpgi1834 10 79996384 to 79996763 379 CpG island CpG island 1834
Tssr94450 10 79996455 to 79996475 20 + TSS region transcription start site region 94450
Tssr94451 10 79996479 to 79996505 26 + TSS region transcription start site region 94451
Abca7 10 79996494 to 80015572 19078 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 7
Tssr94452 10 79996515 to 79996524 9 + TSS region transcription start site region 94452
Tssr94453 10 79996542 to 79996551 9 + TSS region transcription start site region 94453
Cpgi1835 10 79997223 to 79997891 668 CpG island CpG island 1835
Tssr94454 10 79997463 to 79997501 38 + TSS region transcription start site region 94454
Cpgi1836 10 80002623 to 80003010 387 CpG island CpG island 1836
Cpgi1837 10 80013791 to 80014696 905 CpG island CpG island 1837
Tssr94455 10 80015789 to 80015838 49 + TSS region transcription start site region 94455
Tssr94456 10 80016662 to 80016677 15 + TSS region transcription start site region 94456
Arhgap45 10 80016672 to 80031471 14799 + protein coding gene Rho GTPase activating protein 45
Tssr94457 10 80016696 to 80016733 37 + TSS region transcription start site region 94457
Tssr94458 10 80016735 to 80016758 23 + TSS region transcription start site region 94458
Tssr94459 10 80016761 to 80016768 7 + TSS region transcription start site region 94459
Tssr94460 10 80016901 to 80016905 4 + TSS region transcription start site region 94460
Tssr94461 10 80016969 to 80016978 9 + TSS region transcription start site region 94461
Tssr94462 10 80017601 to 80017639 38 + TSS region transcription start site region 94462
Tssr94463 10 80017667 to 80017687 20 + TSS region transcription start site region 94463
Tssr94464 10 80017692 to 80017709 17 + TSS region transcription start site region 94464
Tssr94465 10 80017860 to 80017905 45 + TSS region transcription start site region 94465
Tssr94466 10 80017942 to 80017953 11 + TSS region transcription start site region 94466
Tssr94467 10 80018099 to 80018111 12 + TSS region transcription start site region 94467
Tssr98375 10 80018841 to 80018861 20 - TSS region transcription start site region 98375
Tssr94468 10 80019356 to 80019359 3 + TSS region transcription start site region 94468
Tssr94469 10 80019621 to 80019690 69 + TSS region transcription start site region 94469
Tssr98376 10 80024295 to 80024318 23 - TSS region transcription start site region 98376
Cpgi1838 10 80026092 to 80026420 328 CpG island CpG island 1838
Tssr98377 10 80031460 to 80031470 10 - TSS region transcription start site region 98377
Polr2e 10 80035953 to 80039659 3706 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide E
Tssr98378 10 80036755 to 80036766 11 - TSS region transcription start site region 98378
Cpgi1839 10 80039285 to 80040071 786 CpG island CpG island 1839
Tssr98379 10 80039645 to 80039672 27 - TSS region transcription start site region 98379