Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79766006-79886023

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf126 10 79758515 to 79766952 8437 - protein coding gene ring finger protein 126
Cpgi1809 10 79766035 to 79767876 1841 CpG island CpG island 1809
Tssr98346 10 79766792 to 79766803 11 - TSS region transcription start site region 98346
Tssr98347 10 79766811 to 79766825 14 - TSS region transcription start site region 98347
Tssr98348 10 79766872 to 79766950 78 - TSS region transcription start site region 98348
Tssr98349 10 79766957 to 79766976 19 - TSS region transcription start site region 98349
Tssr98350 10 79766994 to 79767017 23 - TSS region transcription start site region 98350
Cpgi1810 10 79776819 to 79777599 780 CpG island CpG island 1810
Tssr94388 10 79777261 to 79777280 19 + TSS region transcription start site region 94388
Fstl3 10 79777274 to 79782630 5356 + protein coding gene follistatin-like 3
Tssr94389 10 79777289 to 79777298 9 + TSS region transcription start site region 94389
Cpgi1811 10 79779791 to 79781405 1614 CpG island CpG island 1811
Tssr94390 10 79780972 to 79780984 12 + TSS region transcription start site region 94390
Tssr94391 10 79781152 to 79781161 9 + TSS region transcription start site region 94391
Prss57 10 79781474 to 79790961 9487 - protein coding gene protease, serine 57
Cpgi1812 10 79784340 to 79784681 341 CpG island CpG island 1812
Tssr98351 10 79788924 to 79788984 60 - TSS region transcription start site region 98351
Cpgi1813 10 79793053 to 79794183 1130 CpG island CpG island 1813
Tssr94392 10 79793322 to 79793334 12 + TSS region transcription start site region 94392
Tssr94393 10 79793553 to 79793621 68 + TSS region transcription start site region 94393
Palm 10 79793572 to 79820896 27324 + protein coding gene paralemmin
Tssr94394 10 79793658 to 79793673 15 + TSS region transcription start site region 94394
Tssr94395 10 79793677 to 79793721 44 + TSS region transcription start site region 94395
Gm48495 10 79793781 to 79794656 875 - antisense lncRNA gene predicted gene, 48495
Gm40713 10 79800681 to 79807025 6344 - lncRNA gene predicted gene, 40713
Cpgi1814 10 79803729 to 79804128 399 CpG island CpG island 1814
Tssr94396 10 79805986 to 79806005 19 + TSS region transcription start site region 94396
Tssr94397 10 79806012 to 79806031 19 + TSS region transcription start site region 94397
Tssr98352 10 79807068 to 79807099 31 - TSS region transcription start site region 98352
Tssr98353 10 79807110 to 79807135 25 - TSS region transcription start site region 98353
Tssr94398 10 79807262 to 79807277 15 + TSS region transcription start site region 94398
Tssr94399 10 79807282 to 79807320 38 + TSS region transcription start site region 94399
Tssr94400 10 79814586 to 79814623 37 + TSS region transcription start site region 94400
Tssr94401 10 79814666 to 79814684 18 + TSS region transcription start site region 94401
Tssr94402 10 79821006 to 79821029 23 + TSS region transcription start site region 94402
Misp 10 79821019 to 79830452 9433 + protein coding gene mitotic spindle positioning
Tssr94403 10 79822617 to 79822679 62 + TSS region transcription start site region 94403
Tssr94404 10 79824588 to 79824618 30 + TSS region transcription start site region 94404
Tssr94405 10 79824673 to 79824695 22 + TSS region transcription start site region 94405
Tssr94406 10 79824704 to 79824720 16 + TSS region transcription start site region 94406
Tssr94407 10 79826006 to 79826023 17 + TSS region transcription start site region 94407
Tssr94408 10 79826118 to 79826138 20 + TSS region transcription start site region 94408
Tssr94409 10 79826314 to 79826320 6 + TSS region transcription start site region 94409
Tssr94410 10 79840886 to 79840904 18 + TSS region transcription start site region 94410
Tssr98354 10 79849887 to 79849893 6 - TSS region transcription start site region 98354
E130317F20Rik 10 79851381 to 79854971 3590 - bidirectional promoter lncRNA gene RIKEN cDNA E130317F20 gene
Tssr98355 10 79852457 to 79852471 14 - TSS region transcription start site region 98355
Cpgi1815 10 79853904 to 79855783 1879 CpG island CpG island 1815
Tssr98356 10 79854285 to 79854317 32 - TSS region transcription start site region 98356
Ptbp1 10 79854432 to 79864435 10003 + protein coding gene polypyrimidine tract binding protein 1
Tssr94411 10 79854618 to 79854640 22 + TSS region transcription start site region 94411
Tssr94412 10 79854658 to 79854674 16 + TSS region transcription start site region 94412
Tssr94413 10 79859367 to 79859383 16 + TSS region transcription start site region 94413
Tssr94414 10 79859390 to 79859417 27 + TSS region transcription start site region 94414
Tssr94415 10 79859431 to 79859460 29 + TSS region transcription start site region 94415
Plppr3 10 79860475 to 79874634 14159 - protein coding gene phospholipid phosphatase related 3
Tssr94416 10 79861680 to 79861693 13 + TSS region transcription start site region 94416
Mir6910 10 79862587 to 79862652 65 + miRNA gene microRNA 6910
Gm17134 10 79863937 to 79864434 497 - antisense lncRNA gene predicted gene 17134
Cpgi1816 10 79865898 to 79866177 279 CpG island CpG island 1816
Cpgi1817 10 79873894 to 79874992 1098 CpG island CpG island 1817
Tssr3274 10 79874064 to 79874082 18 + TSS region transcription start site region 3274
Tssr98357 10 79874211 to 79874223 12 - TSS region transcription start site region 98357
Tssr98358 10 79874233 to 79874439 206 - TSS region transcription start site region 98358
Del(10Prtn3-Elane)1Ctnp 10 79874476 to 79888216 13740 chromosomal deletion Deletion, Chr 10, Christine T N Pham 1
Tssr94417 10 79874505 to 79874516 11 + TSS region transcription start site region 94417
Tssr98359 10 79874541 to 79874561 20 - TSS region transcription start site region 98359
Tssr98360 10 79874565 to 79874587 22 - TSS region transcription start site region 98360
Tssr98361 10 79874599 to 79874610 11 - TSS region transcription start site region 98361
Tssr98362 10 79874651 to 79874660 9 - TSS region transcription start site region 98362
Tssr94418 10 79879657 to 79879669 12 + TSS region transcription start site region 94418
Prtn3 10 79879667 to 79883174 3507 + protein coding gene proteinase 3
Tssr94419 10 79880980 to 79881020 40 + TSS region transcription start site region 94419
Tssr94420 10 79881023 to 79881037 14 + TSS region transcription start site region 94420
Tssr94421 10 79881045 to 79881059 14 + TSS region transcription start site region 94421
Tssr98363 10 79881126 to 79881163 37 - TSS region transcription start site region 98363
Cpgi1818 10 79881896 to 79882339 443 CpG island CpG island 1818