Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79716302-80056319

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216 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1803 10 79716183 to 79718393 2210 CpG island CpG island 1803
Gm30480 10 79716192 to 79716908 716 - lncRNA gene predicted gene, 30480
Tssr94384 10 79716588 to 79716666 78 + TSS region transcription start site region 94384
Hcn2 10 79716634 to 79736108 19474 + protein coding gene hyperpolarization-activated, cyclic nucleotide-gated K+ 2
Tssr94385 10 79728750 to 79728772 22 + TSS region transcription start site region 94385
Cpgi1804 10 79728896 to 79729059 163 CpG island CpG island 1804
Cpgi1805 10 79734706 to 79736816 2110 CpG island CpG island 1805
Polrmt 10 79736123 to 79746581 10458 - protein coding gene polymerase (RNA) mitochondrial (DNA directed)
Cpgi1806 10 79737991 to 79738194 203 CpG island CpG island 1806
Tssr98340 10 79746084 to 79746088 4 - TSS region transcription start site region 98340
Cpgi1807 10 79746293 to 79746765 472 CpG island CpG island 1807
Tssr98341 10 79746553 to 79746586 33 - TSS region transcription start site region 98341
Fgf22 10 79754575 to 79757572 2997 + protein coding gene fibroblast growth factor 22
Cpgi1808 10 79754961 to 79755507 546 CpG island CpG island 1808
Tssr94386 10 79755103 to 79755126 23 + TSS region transcription start site region 94386
Rnf126 10 79758515 to 79766952 8437 - protein coding gene ring finger protein 126
Tssr98342 10 79759176 to 79759227 51 - TSS region transcription start site region 98342
Tssr94387 10 79761024 to 79761035 11 + TSS region transcription start site region 94387
Tssr98343 10 79761050 to 79761085 35 - TSS region transcription start site region 98343
Tssr98344 10 79761495 to 79761496 1 - TSS region transcription start site region 98344
Tssr98345 10 79762509 to 79762536 27 - TSS region transcription start site region 98345
Cpgi1809 10 79766035 to 79767876 1841 CpG island CpG island 1809
Tssr98346 10 79766792 to 79766803 11 - TSS region transcription start site region 98346
Tssr98347 10 79766811 to 79766825 14 - TSS region transcription start site region 98347
Tssr98348 10 79766872 to 79766950 78 - TSS region transcription start site region 98348
Tssr98349 10 79766957 to 79766976 19 - TSS region transcription start site region 98349
Tssr98350 10 79766994 to 79767017 23 - TSS region transcription start site region 98350
Cpgi1810 10 79776819 to 79777599 780 CpG island CpG island 1810
Tssr94388 10 79777261 to 79777280 19 + TSS region transcription start site region 94388
Fstl3 10 79777274 to 79782630 5356 + protein coding gene follistatin-like 3
Tssr94389 10 79777289 to 79777298 9 + TSS region transcription start site region 94389
Cpgi1811 10 79779791 to 79781405 1614 CpG island CpG island 1811
Tssr94390 10 79780972 to 79780984 12 + TSS region transcription start site region 94390
Tssr94391 10 79781152 to 79781161 9 + TSS region transcription start site region 94391
Prss57 10 79781474 to 79790961 9487 - protein coding gene protease, serine 57
Cpgi1812 10 79784340 to 79784681 341 CpG island CpG island 1812
Tssr98351 10 79788924 to 79788984 60 - TSS region transcription start site region 98351
Cpgi1813 10 79793053 to 79794183 1130 CpG island CpG island 1813
Tssr94392 10 79793322 to 79793334 12 + TSS region transcription start site region 94392
Tssr94393 10 79793553 to 79793621 68 + TSS region transcription start site region 94393
Palm 10 79793572 to 79820896 27324 + protein coding gene paralemmin
Tssr94394 10 79793658 to 79793673 15 + TSS region transcription start site region 94394
Tssr94395 10 79793677 to 79793721 44 + TSS region transcription start site region 94395
Gm48495 10 79793781 to 79794656 875 - antisense lncRNA gene predicted gene, 48495
Gm40713 10 79800681 to 79807025 6344 - lncRNA gene predicted gene, 40713
Cpgi1814 10 79803729 to 79804128 399 CpG island CpG island 1814
Tssr94396 10 79805986 to 79806005 19 + TSS region transcription start site region 94396
Tssr94397 10 79806012 to 79806031 19 + TSS region transcription start site region 94397
Tssr98352 10 79807068 to 79807099 31 - TSS region transcription start site region 98352
Tssr98353 10 79807110 to 79807135 25 - TSS region transcription start site region 98353
Tssr94398 10 79807262 to 79807277 15 + TSS region transcription start site region 94398
Tssr94399 10 79807282 to 79807320 38 + TSS region transcription start site region 94399
Tssr94400 10 79814586 to 79814623 37 + TSS region transcription start site region 94400
Tssr94401 10 79814666 to 79814684 18 + TSS region transcription start site region 94401
Tssr94402 10 79821006 to 79821029 23 + TSS region transcription start site region 94402
Misp 10 79821019 to 79830452 9433 + protein coding gene mitotic spindle positioning
Tssr94403 10 79822617 to 79822679 62 + TSS region transcription start site region 94403
Tssr94404 10 79824588 to 79824618 30 + TSS region transcription start site region 94404
Tssr94405 10 79824673 to 79824695 22 + TSS region transcription start site region 94405
Tssr94406 10 79824704 to 79824720 16 + TSS region transcription start site region 94406
Tssr94407 10 79826006 to 79826023 17 + TSS region transcription start site region 94407
Tssr94408 10 79826118 to 79826138 20 + TSS region transcription start site region 94408
Tssr94409 10 79826314 to 79826320 6 + TSS region transcription start site region 94409
Tssr94410 10 79840886 to 79840904 18 + TSS region transcription start site region 94410
Tssr98354 10 79849887 to 79849893 6 - TSS region transcription start site region 98354
E130317F20Rik 10 79851381 to 79854971 3590 - bidirectional promoter lncRNA gene RIKEN cDNA E130317F20 gene
Tssr98355 10 79852457 to 79852471 14 - TSS region transcription start site region 98355
Cpgi1815 10 79853904 to 79855783 1879 CpG island CpG island 1815
Tssr98356 10 79854285 to 79854317 32 - TSS region transcription start site region 98356
Ptbp1 10 79854432 to 79864435 10003 + protein coding gene polypyrimidine tract binding protein 1
Tssr94411 10 79854618 to 79854640 22 + TSS region transcription start site region 94411
Tssr94412 10 79854658 to 79854674 16 + TSS region transcription start site region 94412
Tssr94413 10 79859367 to 79859383 16 + TSS region transcription start site region 94413
Tssr94414 10 79859390 to 79859417 27 + TSS region transcription start site region 94414
Tssr94415 10 79859431 to 79859460 29 + TSS region transcription start site region 94415
Plppr3 10 79860475 to 79874634 14159 - protein coding gene phospholipid phosphatase related 3
Tssr94416 10 79861680 to 79861693 13 + TSS region transcription start site region 94416
Mir6910 10 79862587 to 79862652 65 + miRNA gene microRNA 6910
Gm17134 10 79863937 to 79864434 497 - antisense lncRNA gene predicted gene 17134
Cpgi1816 10 79865898 to 79866177 279 CpG island CpG island 1816
Cpgi1817 10 79873894 to 79874992 1098 CpG island CpG island 1817
Tssr3274 10 79874064 to 79874082 18 + TSS region transcription start site region 3274
Tssr98357 10 79874211 to 79874223 12 - TSS region transcription start site region 98357
Tssr98358 10 79874233 to 79874439 206 - TSS region transcription start site region 98358
Del(10Prtn3-Elane)1Ctnp 10 79874476 to 79888216 13740 chromosomal deletion Deletion, Chr 10, Christine T N Pham 1
Tssr94417 10 79874505 to 79874516 11 + TSS region transcription start site region 94417
Tssr98359 10 79874541 to 79874561 20 - TSS region transcription start site region 98359
Tssr98360 10 79874565 to 79874587 22 - TSS region transcription start site region 98360
Tssr98361 10 79874599 to 79874610 11 - TSS region transcription start site region 98361
Tssr98362 10 79874651 to 79874660 9 - TSS region transcription start site region 98362
Tssr94418 10 79879657 to 79879669 12 + TSS region transcription start site region 94418
Prtn3 10 79879667 to 79883174 3507 + protein coding gene proteinase 3
Tssr94419 10 79880980 to 79881020 40 + TSS region transcription start site region 94419
Tssr94420 10 79881023 to 79881037 14 + TSS region transcription start site region 94420
Tssr94421 10 79881045 to 79881059 14 + TSS region transcription start site region 94421
Tssr98363 10 79881126 to 79881163 37 - TSS region transcription start site region 98363
Cpgi1818 10 79881896 to 79882339 443 CpG island CpG island 1818
Tssr94422 10 79886302 to 79886319 17 + TSS region transcription start site region 94422
Elane 10 79886312 to 79888216 1904 + protein coding gene elastase, neutrophil expressed
Tssr94423 10 79886811 to 79886819 8 + TSS region transcription start site region 94423
Tssr94424 10 79886882 to 79886902 20 + TSS region transcription start site region 94424
Tssr94425 10 79887625 to 79887644 19 + TSS region transcription start site region 94425
Tssr94426 10 79887664 to 79887685 21 + TSS region transcription start site region 94426
Tssr94427 10 79887917 to 79887925 8 + TSS region transcription start site region 94427
Tssr98364 10 79888095 to 79888122 27 - TSS region transcription start site region 98364
Tssr3275 10 79888126 to 79888133 7 - TSS region transcription start site region 3275
Tssr94428 10 79888666 to 79888667 1 + TSS region transcription start site region 94428
Gm19810 10 79888712 to 79888962 250 + pseudogene predicted gene, 19810
Cfd 10 79890853 to 79892655 1802 + protein coding gene complement factor D (adipsin)
Tssr94429 10 79890903 to 79890918 15 + TSS region transcription start site region 94429
Med16 10 79894708 to 79908923 14215 - protein coding gene mediator complex subunit 16
Cpgi1819 10 79908423 to 79909003 580 CpG island CpG island 1819
Tssr98365 10 79908891 to 79908936 45 - TSS region transcription start site region 98365
Gm24019 10 79909195 to 79909301 106 + snRNA gene predicted gene, 24019
R3hdm4 10 79910052 to 79917047 6995 - protein coding gene R3H domain containing 4
Tssr98366 10 79910331 to 79910348 17 - TSS region transcription start site region 98366
Gm26602 10 79910856 to 79911140 284 + protein coding gene predicted gene, 26602
Tssr98367 10 79913685 to 79913703 18 - TSS region transcription start site region 98367
Cpgi1820 10 79916654 to 79917258 604 CpG island CpG island 1820
Tssr98368 10 79916878 to 79916906 28 - TSS region transcription start site region 98368
Tssr98369 10 79916912 to 79916945 33 - TSS region transcription start site region 98369
Tssr94430 10 79916957 to 79916986 29 + TSS region transcription start site region 94430
Kiss1r 10 79916971 to 79922273 5302 + protein coding gene KISS1 receptor
Cpgi1821 10 79918421 to 79918949 528 CpG island CpG island 1821
Tssr94431 10 79918501 to 79918508 7 + TSS region transcription start site region 94431
Cpgi1822 10 79920379 to 79922051 1672 CpG island CpG island 1822
Gm40715 10 79924693 to 79926933 2240 - lncRNA gene predicted gene, 40715
Cpgi1823 10 79925354 to 79925595 241 CpG island CpG island 1823
Cpgi1824 10 79926275 to 79928308 2033 CpG island CpG island 1824
Tssr94432 10 79927039 to 79927088 49 + TSS region transcription start site region 94432
Arid3a 10 79927043 to 79955018 27975 + protein coding gene AT rich interactive domain 3A (BRIGHT-like)
Tssr94433 10 79927330 to 79927370 40 + TSS region transcription start site region 94433
Tssr94434 10 79927375 to 79927384 9 + TSS region transcription start site region 94434
Tssr94435 10 79930394 to 79930409 15 + TSS region transcription start site region 94435
Tssr94436 10 79930419 to 79930428 9 + TSS region transcription start site region 94436
Cpgi1825 10 79936950 to 79937586 636 CpG island CpG island 1825
Tssr94437 10 79946273 to 79946296 23 + TSS region transcription start site region 94437
Tssr94438 10 79948975 to 79949003 28 + TSS region transcription start site region 94438
Tssr94439 10 79952299 to 79952316 17 + TSS region transcription start site region 94439
Tssr94440 10 79952406 to 79952413 7 + TSS region transcription start site region 94440
Tssr94441 10 79954401 to 79954445 44 + TSS region transcription start site region 94441
Cpgi1826 10 79958252 to 79958550 298 CpG island CpG island 1826
Cpgi1827 10 79959830 to 79960800 970 CpG island CpG island 1827
Wdr18 10 79959989 to 79969247 9258 + protein coding gene WD repeat domain 18
Tssr94442 10 79960145 to 79960162 17 + TSS region transcription start site region 94442
Tssr98370 10 79961319 to 79961342 23 - TSS region transcription start site region 98370
D10Jhu78 10 79966796 to 79966978 182 DNA segment DNA segment, Chr 10, Johns Hopkins University 78
Tssr94443 10 79967304 to 79967343 39 + TSS region transcription start site region 94443
Cpgi1828 10 79970647 to 79971723 1076 CpG island CpG island 1828
Grin3b 10 79970715 to 79977190 6475 + protein coding gene glutamate receptor, ionotropic, NMDA3B
Cpgi1829 10 79975578 to 79977763 2185 CpG island CpG island 1829
Tmem259 10 79977120 to 79984330 7210 - protein coding gene transmembrane protein 259
Cpgi1830 10 79983614 to 79985254 1640 CpG island CpG island 1830
Tssr98371 10 79983970 to 79984016 46 - TSS region transcription start site region 98371
Tssr98372 10 79984227 to 79984319 92 - TSS region transcription start site region 98372
Tssr3276 10 79984656 to 79984659 3 + TSS region transcription start site region 3276
Gm26243 10 79985506 to 79985612 106 + snRNA gene predicted gene, 26243
Cpgi1831 10 79985700 to 79985896 196 CpG island CpG island 1831
Cpgi1832 10 79988360 to 79989329 969 CpG island CpG island 1832
Tssr94444 10 79988589 to 79988683 94 + TSS region transcription start site region 94444
Cnn2 10 79988600 to 79995400 6800 + protein coding gene calponin 2
Cpgi1833 10 79990894 to 79991334 440 CpG island CpG island 1833
Tssr94445 10 79991574 to 79991583 9 + TSS region transcription start site region 94445
Tssr94446 10 79994845 to 79994858 13 + TSS region transcription start site region 94446
Tssr94447 10 79995018 to 79995035 17 + TSS region transcription start site region 94447
Tssr94448 10 79995078 to 79995090 12 + TSS region transcription start site region 94448
Tssr94449 10 79995258 to 79995302 44 + TSS region transcription start site region 94449
Tssr98373 10 79995319 to 79995348 29 - TSS region transcription start site region 98373
Tssr98374 10 79995383 to 79995402 19 - TSS region transcription start site region 98374
Cpgi1834 10 79996384 to 79996763 379 CpG island CpG island 1834
Tssr94450 10 79996455 to 79996475 20 + TSS region transcription start site region 94450
Tssr94451 10 79996479 to 79996505 26 + TSS region transcription start site region 94451
Abca7 10 79996494 to 80015572 19078 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 7
Tssr94452 10 79996515 to 79996524 9 + TSS region transcription start site region 94452
Tssr94453 10 79996542 to 79996551 9 + TSS region transcription start site region 94453
Cpgi1835 10 79997223 to 79997891 668 CpG island CpG island 1835
Tssr94454 10 79997463 to 79997501 38 + TSS region transcription start site region 94454
Cpgi1836 10 80002623 to 80003010 387 CpG island CpG island 1836
Cpgi1837 10 80013791 to 80014696 905 CpG island CpG island 1837
Tssr94455 10 80015789 to 80015838 49 + TSS region transcription start site region 94455
Tssr94456 10 80016662 to 80016677 15 + TSS region transcription start site region 94456
Arhgap45 10 80016672 to 80031471 14799 + protein coding gene Rho GTPase activating protein 45
Tssr94457 10 80016696 to 80016733 37 + TSS region transcription start site region 94457
Tssr94458 10 80016735 to 80016758 23 + TSS region transcription start site region 94458
Tssr94459 10 80016761 to 80016768 7 + TSS region transcription start site region 94459
Tssr94460 10 80016901 to 80016905 4 + TSS region transcription start site region 94460
Tssr94461 10 80016969 to 80016978 9 + TSS region transcription start site region 94461
Tssr94462 10 80017601 to 80017639 38 + TSS region transcription start site region 94462
Tssr94463 10 80017667 to 80017687 20 + TSS region transcription start site region 94463
Tssr94464 10 80017692 to 80017709 17 + TSS region transcription start site region 94464
Tssr94465 10 80017860 to 80017905 45 + TSS region transcription start site region 94465
Tssr94466 10 80017942 to 80017953 11 + TSS region transcription start site region 94466
Tssr94467 10 80018099 to 80018111 12 + TSS region transcription start site region 94467
Tssr98375 10 80018841 to 80018861 20 - TSS region transcription start site region 98375
Tssr94468 10 80019356 to 80019359 3 + TSS region transcription start site region 94468
Tssr94469 10 80019621 to 80019690 69 + TSS region transcription start site region 94469
Tssr98376 10 80024295 to 80024318 23 - TSS region transcription start site region 98376
Cpgi1838 10 80026092 to 80026420 328 CpG island CpG island 1838
Tssr98377 10 80031460 to 80031470 10 - TSS region transcription start site region 98377
Polr2e 10 80035953 to 80039659 3706 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide E