Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79625749-79665762

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shc2 10 79618051 to 79637918 19867 - protein coding gene SHC (Src homology 2 domain containing) transforming protein 2
Tssr94354 10 79633604 to 79633609 5 + TSS region transcription start site region 94354
Cpgi1796 10 79636956 to 79638424 1468 CpG island CpG island 1796
Tssr94355 10 79637257 to 79637296 39 + TSS region transcription start site region 94355
Tssr94356 10 79637299 to 79637330 31 + TSS region transcription start site region 94356
Tssr98332 10 79637842 to 79637908 66 - TSS region transcription start site region 98332
Gm47163 10 79637856 to 79639520 1664 + bidirectional promoter lncRNA gene predicted gene, 47163
Tssr98333 10 79637909 to 79637922 13 - TSS region transcription start site region 98333
Cpgi1797 10 79638904 to 79639148 244 CpG island CpG island 1797
Odf3l2 10 79639526 to 79645738 6212 - protein coding gene outer dense fiber of sperm tails 3-like 2
Tssr98334 10 79645732 to 79645744 12 - TSS region transcription start site region 98334
Tssr98335 10 79645749 to 79645762 13 - TSS region transcription start site region 98335
Tssr3268 10 79664374 to 79664383 9 + TSS region transcription start site region 3268
Tssr94357 10 79664553 to 79664564 11 + TSS region transcription start site region 94357
Madcam1 10 79664559 to 79668537 3978 + protein coding gene mucosal vascular addressin cell adhesion molecule 1
Tssr94358 10 79664587 to 79664603 16 + TSS region transcription start site region 94358
Tssr94359 10 79665467 to 79665470 3 + TSS region transcription start site region 94359
Tssr94360 10 79665500 to 79665510 10 + TSS region transcription start site region 94360
Tssr94361 10 79665530 to 79665534 4 + TSS region transcription start site region 94361