Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:79605749-79685762

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C2cd4c 10 79606854 to 79614025 7171 - protein coding gene C2 calcium-dependent domain containing 4C
Cpgi1794 10 79612192 to 79613082 890 CpG island CpG island 1794
Cpgi1795 10 79613456 to 79614401 945 CpG island CpG island 1795
Tssr98330 10 79614012 to 79614055 43 - TSS region transcription start site region 98330
Tssr98331 10 79614153 to 79614193 40 - TSS region transcription start site region 98331
Shc2 10 79618051 to 79637918 19867 - protein coding gene SHC (Src homology 2 domain containing) transforming protein 2
Tssr94354 10 79633604 to 79633609 5 + TSS region transcription start site region 94354
Cpgi1796 10 79636956 to 79638424 1468 CpG island CpG island 1796
Tssr94355 10 79637257 to 79637296 39 + TSS region transcription start site region 94355
Tssr94356 10 79637299 to 79637330 31 + TSS region transcription start site region 94356
Tssr98332 10 79637842 to 79637908 66 - TSS region transcription start site region 98332
Gm47163 10 79637856 to 79639520 1664 + bidirectional promoter lncRNA gene predicted gene, 47163
Tssr98333 10 79637909 to 79637922 13 - TSS region transcription start site region 98333
Cpgi1797 10 79638904 to 79639148 244 CpG island CpG island 1797
Odf3l2 10 79639526 to 79645738 6212 - protein coding gene outer dense fiber of sperm tails 3-like 2
Tssr98334 10 79645732 to 79645744 12 - TSS region transcription start site region 98334
Tssr98335 10 79645749 to 79645762 13 - TSS region transcription start site region 98335
Tssr3268 10 79664374 to 79664383 9 + TSS region transcription start site region 3268
Tssr94357 10 79664553 to 79664564 11 + TSS region transcription start site region 94357
Madcam1 10 79664559 to 79668537 3978 + protein coding gene mucosal vascular addressin cell adhesion molecule 1
Tssr94358 10 79664587 to 79664603 16 + TSS region transcription start site region 94358
Tssr94359 10 79665467 to 79665470 3 + TSS region transcription start site region 94359
Tssr94360 10 79665500 to 79665510 10 + TSS region transcription start site region 94360
Tssr94361 10 79665530 to 79665534 4 + TSS region transcription start site region 94361
Cpgi1798 10 79668987 to 79670392 1405 CpG island CpG island 1798
Tpgs1 10 79669410 to 79676126 6716 + protein coding gene tubulin polyglutamylase complex subunit 1
Tssr94362 10 79669413 to 79669459 46 + TSS region transcription start site region 94362
Tssr94363 10 79669469 to 79669480 11 + TSS region transcription start site region 94363
Tssr94364 10 79669481 to 79669492 11 + TSS region transcription start site region 94364
Tssr94365 10 79669498 to 79669507 9 + TSS region transcription start site region 94365
Tssr94366 10 79669871 to 79669905 34 + TSS region transcription start site region 94366
Tssr98336 10 79671471 to 79671489 18 - TSS region transcription start site region 98336
Cpgi1799 10 79675378 to 79675872 494 CpG island CpG island 1799
Tssr3269 10 79681014 to 79681040 26 + TSS region transcription start site region 3269
Cpgi1800 10 79681273 to 79682856 1583 CpG island CpG island 1800
Tssr94367 10 79681784 to 79681813 29 + TSS region transcription start site region 94367
Tssr3270 10 79681825 to 79681833 8 + TSS region transcription start site region 3270
Tssr94368 10 79682147 to 79682161 14 + TSS region transcription start site region 94368
Tssr94369 10 79682169 to 79682230 61 + TSS region transcription start site region 94369
Cdc34 10 79682195 to 79688398 6203 + protein coding gene cell division cycle 34
Tssr94370 10 79682232 to 79682247 15 + TSS region transcription start site region 94370
Tssr94371 10 79682306 to 79682322 16 + TSS region transcription start site region 94371
Tssr94372 10 79682370 to 79682408 38 + TSS region transcription start site region 94372