Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:7924714-8794928

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tab2 10 7905653 to 7956230 50577 - protein coding gene TGF-beta activated kinase 1/MAP3K7 binding protein 2
Tssr96617 10 7936058 to 7936062 4 - TSS region transcription start site region 96617
Tssr96618 10 7946820 to 7946833 13 - TSS region transcription start site region 96618
6430537I21Rik 10 7949947 to 7954572 4625 unclassified gene RIKEN cDNA 6430537I21 gene
Tssr96619 10 7950160 to 7950167 7 - TSS region transcription start site region 96619
Cpgi1281 10 7955187 to 7957001 1814 CpG island CpG island 1281
Tssr96620 10 7955898 to 7955942 44 - TSS region transcription start site region 96620
Tssr96621 10 7956063 to 7956147 84 - TSS region transcription start site region 96621
Tssr96622 10 7956223 to 7956271 48 - TSS region transcription start site region 96622
Tssr96623 10 7956274 to 7956290 16 - TSS region transcription start site region 96623
Tssr96624 10 7956452 to 7956488 36 - TSS region transcription start site region 96624
Gm30820 10 7979880 to 7988871 8991 + lncRNA gene predicted gene, 30820
Gm48614 10 8001943 to 8021292 19349 - lincRNA gene predicted gene, 48614
Cpgi1282 10 8135673 to 8135914 241 CpG island CpG island 1282
Gm30906 10 8176131 to 8193340 17209 + lincRNA gene predicted gene, 30906
Gm30959 10 8192735 to 8196684 3949 - lncRNA gene predicted gene, 30959
Ust 10 8204756 to 8518825 314069 - protein coding gene uronyl-2-sulfotransferase
Cpgi1283 10 8207397 to 8207582 185 CpG island CpG island 1283
4930573G07Rik 10 8212274 to 8233991 21717 + lncRNA gene RIKEN cDNA 4930573G07 gene
Cpgi1284 10 8214028 to 8214278 250 CpG island CpG island 1284
Tssr92332 10 8214263 to 8214274 11 + TSS region transcription start site region 92332
Gm31052 10 8246528 to 8258632 12104 + lncRNA gene predicted gene, 31052
Tssr96625 10 8290224 to 8290229 5 - TSS region transcription start site region 96625
Tssr96626 10 8358325 to 8358356 31 - TSS region transcription start site region 96626
D10Mit305 10 8359714 to 8359928 214 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-305
Tssr96627 10 8451822 to 8451826 4 - TSS region transcription start site region 96627
Tssr96628 10 8453019 to 8453048 29 - TSS region transcription start site region 96628
Tssr96629 10 8471816 to 8471822 6 - TSS region transcription start site region 96629
D10Mit76 10 8503628 to 8503826 198 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 76
Tssr96630 10 8511621 to 8511627 6 - TSS region transcription start site region 96630
Cpgi1285 10 8517541 to 8519201 1660 CpG island CpG island 1285
Tssr96631 10 8518475 to 8518491 16 - TSS region transcription start site region 96631
Tssr96632 10 8518782 to 8518800 18 - TSS region transcription start site region 96632
Tssr96633 10 8518801 to 8518851 50 - TSS region transcription start site region 96633
Gm40600 10 8545041 to 8547144 2103 - protein coding gene predicted gene, 40600
Gm24374 10 8642934 to 8643039 105 + snRNA gene predicted gene, 24374
Gm48654 10 8713241 to 8717073 3832 + lincRNA gene predicted gene, 48654
Tssr96634 10 8721916 to 8721922 6 - TSS region transcription start site region 96634
Sash1 10 8722219 to 8886070 163851 - protein coding gene SAM and SH3 domain containing 1
Tssr96635 10 8723528 to 8723542 14 - TSS region transcription start site region 96635
Tssr96636 10 8725094 to 8725119 25 - TSS region transcription start site region 96636
Tssr96637 10 8749132 to 8749164 32 - TSS region transcription start site region 96637
Tssr92333 10 8751900 to 8751903 3 + TSS region transcription start site region 92333
Tssr96638 10 8756757 to 8756768 11 - TSS region transcription start site region 96638
Tssr96639 10 8760602 to 8760626 24 - TSS region transcription start site region 96639
Tssr96640 10 8762219 to 8762259 40 - TSS region transcription start site region 96640
Tssr96641 10 8762269 to 8762283 14 - TSS region transcription start site region 96641
Tssr96642 10 8762288 to 8762314 26 - TSS region transcription start site region 96642
Tssr96643 10 8762349 to 8762370 21 - TSS region transcription start site region 96643
Tssr3133 10 8762385 to 8762396 11 - TSS region transcription start site region 3133
Tssr96644 10 8762451 to 8762466 15 - TSS region transcription start site region 96644
Tssr96645 10 8762579 to 8762616 37 - TSS region transcription start site region 96645
D10Mit298 10 8787531 to 8787680 149 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 298
Obsty3 10 116355075 to 8359714 -107995361 QTL obesity 3