Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:78481669-78748074

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1783 10 78481689 to 78482486 797 CpG island CpG island 1783
Gm9978 10 78484570 to 78487842 3272 - protein coding gene predicted gene 9978
Gm30232 10 78487088 to 78493520 6432 + lncRNA gene predicted gene, 30232
Cpgi1784 10 78487568 to 78487985 417 CpG island CpG island 1784
Gm47944 10 78501925 to 78520219 18294 - lincRNA gene predicted gene, 47944
D10Jhu34e 10 78504725 to 78504910 185 DNA segment DNA segment, Chr 10, Johns Hopkins University 34 expressed
Olfr1358 10 78517428 to 78520566 3138 + protein coding gene olfactory receptor 1358
Gm25164 10 78518623 to 78518738 115 + rRNA gene predicted gene, 25164
Gm27541 10 78525989 to 78526110 121 + miRNA gene predicted gene, 27541
D10Jhu37 10 78526173 to 78526318 145 DNA segment DNA segment, Chr 10, Johns Hopkins University 37
Tssr94335 10 78542660 to 78542662 2 + TSS region transcription start site region 94335
Gm5951 10 78543276 to 78543779 503 + pseudogene predicted gene 5951
Vmn2r-ps92 10 78554051 to 78554417 366 + pseudogene vomeronasal 2, receptor, pseudogene 92
D10Jhu36 10 78555110 to 78555524 414 DNA segment DNA segment, Chr 10, Johns Hopkins University 36
Cpgi1785 10 78574184 to 78575192 1008 CpG island CpG island 1785
Ilvbl 10 78574346 to 78584502 10156 + protein coding gene ilvB (bacterial acetolactate synthase)-like
Tssr94336 10 78574492 to 78574545 53 + TSS region transcription start site region 94336
Tssr98312 10 78574864 to 78574880 16 - TSS region transcription start site region 98312
Tssr98313 10 78574900 to 78574912 12 - TSS region transcription start site region 98313
Tssr94337 10 78574990 to 78575063 73 + TSS region transcription start site region 94337
Tssr94338 10 78575067 to 78575089 22 + TSS region transcription start site region 94338
Tssr94339 10 78576976 to 78576993 17 + TSS region transcription start site region 94339
Tssr94340 10 78577055 to 78577075 20 + TSS region transcription start site region 94340
Tssr94341 10 78577094 to 78577110 16 + TSS region transcription start site region 94341
Tssr98314 10 78578239 to 78578262 23 - TSS region transcription start site region 98314
Syde1 10 78584503 to 78591964 7461 - protein coding gene synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
Cpgi1786 10 78591490 to 78592134 644 CpG island CpG island 1786
Tssr94342 10 78591664 to 78591692 28 + TSS region transcription start site region 94342
Tssr94343 10 78591695 to 78591712 17 + TSS region transcription start site region 94343
Gm30346 10 78591713 to 78593411 1698 + lncRNA gene predicted gene, 30346
Tssr98315 10 78591887 to 78591934 47 - TSS region transcription start site region 98315
Tssr98316 10 78591935 to 78591942 7 - TSS region transcription start site region 98316
Tssr98317 10 78591945 to 78591953 8 - TSS region transcription start site region 98317
Tssr94344 10 78592035 to 78592037 2 + TSS region transcription start site region 94344
D10Jhu35 10 78595445 to 78595700 255 DNA segment DNA segment, Chr 10, Johns Hopkins University 35
Tssr94345 10 78595498 to 78595509 11 + TSS region transcription start site region 94345
Tssr94346 10 78595510 to 78595583 73 + TSS region transcription start site region 94346
Tssr94347 10 78596564 to 78596569 5 + TSS region transcription start site region 94347
Gm37514 10 78599122 to 78601874 2752 - unclassified gene predicted gene, 37514
Tssr94348 10 78602544 to 78602548 4 + TSS region transcription start site region 94348
Olfr1357 10 78611669 to 78618074 6405 - protein coding gene olfactory receptor 1357
Gm7842 10 78628919 to 78630228 1309 - pseudogene predicted gene 7842
Gm47459 10 78629554 to 78632624 3070 + lincRNA gene predicted gene, 47459
D10Mit288 10 78663748 to 78664005 257 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 288
Gm47476 10 78694971 to 78698808 3837 - pseudogene predicted gene, 47476
Gm47495 10 78699609 to 78699873 264 + pseudogene predicted gene, 47495
Casp14 10 78711991 to 78718294 6303 - protein coding gene caspase 14
Tssr98318 10 78712976 to 78712978 2 - TSS region transcription start site region 98318
Tssr98319 10 78718270 to 78718304 34 - TSS region transcription start site region 98319
Ccdc105 10 78746926 to 78753065 6139 - protein coding gene coiled-coil domain containing 105
Cpgi1787 10 78746955 to 78747342 387 CpG island CpG island 1787
Gm30400 10 78747130 to 78767585 20455 + lncRNA gene predicted gene, 30400