MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:78444945-78484965

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(10Prmt2-Pdxk)4Yey	10	76207226 to 78464948	2257722		chromosomal deletion	deletion, Chr 10, Y Eugene Yu 4
Dp(10Prmt2-Pdxk)2Yey	10	76207226 to 78464948	2257722		chromosomal duplication	duplication, Chr 10, Y Eugene Yu 2
Pdxk	10	78436747 to 78464948	28201	-	protein coding gene	pyridoxal (pyridoxine, vitamin B6) kinase
Mir6908	10	78445095 to 78445157	62	-	miRNA gene	microRNA 6908
D10Jhu33	10	78445689 to 78445813	124		DNA segment	DNA segment, Chr 10, Johns Hopkins University 33
Cpgi1782	10	78464380 to 78465394	1014		CpG island	CpG island 1782
Tssr98309	10	78464887 to 78464944	57	-	TSS region	transcription start site region 98309
Tssr98310	10	78464945 to 78464965	20	-	TSS region	transcription start site region 98310
Tssr98311	10	78464969 to 78464987	18	-	TSS region	transcription start site region 98311
Tssr94332	10	78465164 to 78465190	26	+	TSS region	transcription start site region 94332
Tssr94333	10	78465200 to 78465216	16	+	TSS region	transcription start site region 94333
Tssr94334	10	78465436 to 78465476	40	+	TSS region	transcription start site region 94334
D10Jhu38	10	78465567 to 78465853	286		DNA segment	DNA segment, Chr 10, Johns Hopkins University 38
4933436P19Rik	10	78469815 to 78471256	1441	-	unclassified gene	RIKEN cDNA 4933436P19 gene
Cpgi1783	10	78481689 to 78482486	797		CpG island	CpG island 1783
Gm9978	10	78484570 to 78487842	3272	-	protein coding gene	predicted gene 9978