Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:78064823-78265035

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1772 10 78069095 to 78070127 1032 CpG island CpG island 1772
Tssr94319 10 78069320 to 78069346 26 + TSS region transcription start site region 94319
Tssr94320 10 78069351 to 78069371 20 + TSS region transcription start site region 94320
Icosl 10 78069368 to 78079525 10157 + protein coding gene icos ligand
Tssr94321 10 78078874 to 78078899 25 + TSS region transcription start site region 94321
Gm30039 10 78091338 to 78092957 1619 - lncRNA gene predicted gene, 30039
Tssr98268 10 78092750 to 78092758 8 - TSS region transcription start site region 98268
D10Jhu42 10 78111537 to 78111774 237 DNA segment DNA segment, Chr 10, Johns Hopkins University 42
Gm47922 10 78121433 to 78138097 16664 - lincRNA gene predicted gene, 47922
D10Jhu41 10 78161758 to 78162148 390 DNA segment DNA segment, Chr 10, Johns Hopkins University 41
Gatd3a 10 78162067 to 78169768 7701 - protein coding gene glutamine amidotransferase like class 1 domain containing 3A
D10Jhu40 10 78162495 to 78162754 259 DNA segment DNA segment, Chr 10, Johns Hopkins University 40
Cpgi1773 10 78164823 to 78165035 212 CpG island CpG island 1773
Cpgi1774 10 78169289 to 78170243 954 CpG island CpG island 1774
Tssr98269 10 78169726 to 78169792 66 - TSS region transcription start site region 98269
Pwp2 10 78170909 to 78185149 14240 - protein coding gene PWP2 periodic tryptophan protein homolog (yeast)
Cpgi1775 10 78184863 to 78185440 577 CpG island CpG island 1775
Tssr98270 10 78185102 to 78185155 53 - TSS region transcription start site region 98270
Trappc10 10 78186725 to 78244641 57916 - protein coding gene trafficking protein particle complex 10
D10Mit139 10 78232660 to 78232805 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 139
D10Mit139.1 10 78232774 to 78232886 112 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 139.1
Tssr98271 10 78234736 to 78234740 4 - TSS region transcription start site region 98271
D10Mit260 10 78235707 to 78235954 247 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 260
Cpgi1776 10 78243883 to 78245339 1456 CpG island CpG island 1776
Tssr98272 10 78244602 to 78244676 74 - TSS region transcription start site region 98272
Gm40708 10 78246624 to 78255434 8810 + lncRNA gene predicted gene, 40708
Gm30122 10 78248880 to 78264096 15216 - lincRNA gene predicted gene, 30122
Gm47976 10 78264531 to 78266075 1544 - unclassified gene predicted gene, 47976