Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:77889058-77990259

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr94300 10 77893056 to 77893089 33 + TSS region transcription start site region 94300
Tssr94301 10 77893413 to 77893431 18 + TSS region transcription start site region 94301
1700009J07Rik 10 77893420 to 77896111 2691 + lincRNA gene RIKEN cDNA 1700009J07 gene
Tssr94302 10 77893435 to 77893442 7 + TSS region transcription start site region 94302
Lrrc3 10 77897575 to 77902536 4961 - protein coding gene leucine rich repeat containing 3
Tssr98251 10 77897913 to 77897931 18 - TSS region transcription start site region 98251
Cpgi1765 10 77901917 to 77903423 1506 CpG island CpG island 1765
Tssr98252 10 77902428 to 77902461 33 - TSS region transcription start site region 98252
Tssr98253 10 77902467 to 77902529 62 - TSS region transcription start site region 98253
Trpm2 10 77907722 to 77969911 62189 - protein coding gene transient receptor potential cation channel, subfamily M, member 2
Gm22394 10 77912636 to 77912711 75 - snoRNA gene predicted gene, 22394
Gm22871 10 77913798 to 77913851 53 - snoRNA gene predicted gene, 22871
Tssr98254 10 77924126 to 77924135 9 - TSS region transcription start site region 98254
Tssr98255 10 77924181 to 77924204 23 - TSS region transcription start site region 98255
Tssr98256 10 77924285 to 77924305 20 - TSS region transcription start site region 98256
D10Jhu47 10 77938070 to 77938415 345 DNA segment DNA segment, Chr 10, Johns Hopkins University 47
Gm40705 10 77939058 to 77940259 1201 - lncRNA gene predicted gene, 40705
D10Jhu45 10 77962782 to 77962921 139 DNA segment DNA segment, Chr 10, Johns Hopkins University 45
D10Jhu46 10 77962928 to 77963066 138 DNA segment DNA segment, Chr 10, Johns Hopkins University 46
Cpgi1766 10 77969654 to 77970136 482 CpG island CpG island 1766
Tssr98257 10 77969808 to 77969839 31 - TSS region transcription start site region 98257
Tssr98258 10 77970521 to 77970531 10 - TSS region transcription start site region 98258
Tssr98259 10 77970554 to 77970586 32 - TSS region transcription start site region 98259
Cpgi1767 10 77978033 to 77978964 931 CpG island CpG island 1767
Cfap410 10 77978530 to 77985438 6908 + protein coding gene cilia and flagella associated protein 410
Tssr94303 10 77978620 to 77978671 51 + TSS region transcription start site region 94303
Tssr94304 10 77978690 to 77978701 11 + TSS region transcription start site region 94304
Tssr94305 10 77980668 to 77980669 1 + TSS region transcription start site region 94305
Pfkl 10 77986947 to 78009796 22849 - protein coding gene phosphofructokinase, liver, B-type
Tssr98260 10 77990221 to 77990238 17 - TSS region transcription start site region 98260