Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:77842428-77962461

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tspear 10 77686569 to 77887021 200452 + protein coding gene thrombospondin type laminin G domain and EAR repeats
Gm36176 10 77846803 to 77847303 500 + protein coding gene predicted gene, 36176
Tssr94296 10 77852810 to 77852816 6 + TSS region transcription start site region 94296
Gm10318 10 77852859 to 77853788 929 + protein coding gene predicted gene 10318
Tssr94297 10 77861951 to 77861956 5 + TSS region transcription start site region 94297
Gm3285 10 77861975 to 77862638 663 + protein coding gene predicted gene 3285
Tssr94298 10 77862262 to 77862280 18 + TSS region transcription start site region 94298
Tssr94299 10 77864607 to 77864643 36 + TSS region transcription start site region 94299
Cpgi1764 10 77864669 to 77864915 246 CpG island CpG island 1764
Tssr3264 10 77874574 to 77874577 3 + TSS region transcription start site region 3264
D10Jhu48 10 77878566 to 77878846 280 DNA segment DNA segment, Chr 10, Johns Hopkins University 48
Tssr3265 10 77880083 to 77880086 3 + TSS region transcription start site region 3265
Tssr94300 10 77893056 to 77893089 33 + TSS region transcription start site region 94300
Tssr94301 10 77893413 to 77893431 18 + TSS region transcription start site region 94301
1700009J07Rik 10 77893420 to 77896111 2691 + lincRNA gene RIKEN cDNA 1700009J07 gene
Tssr94302 10 77893435 to 77893442 7 + TSS region transcription start site region 94302
Lrrc3 10 77897575 to 77902536 4961 - protein coding gene leucine rich repeat containing 3
Tssr98251 10 77897913 to 77897931 18 - TSS region transcription start site region 98251
Cpgi1765 10 77901917 to 77903423 1506 CpG island CpG island 1765
Tssr98252 10 77902428 to 77902461 33 - TSS region transcription start site region 98252
Tssr98253 10 77902467 to 77902529 62 - TSS region transcription start site region 98253
Trpm2 10 77907722 to 77969911 62189 - protein coding gene transient receptor potential cation channel, subfamily M, member 2
Gm22394 10 77912636 to 77912711 75 - snoRNA gene predicted gene, 22394
Gm22871 10 77913798 to 77913851 53 - snoRNA gene predicted gene, 22871
Tssr98254 10 77924126 to 77924135 9 - TSS region transcription start site region 98254
Tssr98255 10 77924181 to 77924204 23 - TSS region transcription start site region 98255
Tssr98256 10 77924285 to 77924305 20 - TSS region transcription start site region 98256
D10Jhu47 10 77938070 to 77938415 345 DNA segment DNA segment, Chr 10, Johns Hopkins University 47
Gm40705 10 77939058 to 77940259 1201 - lncRNA gene predicted gene, 40705