Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:77714682-77915404

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tspear 10 77686569 to 77887021 200452 + protein coding gene thrombospondin type laminin G domain and EAR repeats
Tssr94283 10 77715768 to 77715773 5 + TSS region transcription start site region 94283
Gm10142 10 77715807 to 77716169 362 + protein coding gene predicted gene 10142
Gm48179 10 77717896 to 77718418 522 - pseudogene predicted gene, 48179
Tssr94284 10 77720584 to 77720593 9 + TSS region transcription start site region 94284
Krtap12-1 10 77720599 to 77721254 655 + protein coding gene keratin associated protein 12-1
Tssr94285 10 77726449 to 77726452 3 + TSS region transcription start site region 94285
Gm10100 10 77726486 to 77726848 362 + protein coding gene predicted gene 10100
Gm48180 10 77734841 to 77735155 314 - pseudogene predicted gene, 48180
Tssr98242 10 77735192 to 77735195 3 - TSS region transcription start site region 98242
D10Jhu25 10 77740505 to 77740608 103 DNA segment DNA segment, Chr 10, Johns Hopkins University 25
Gm18596 10 77741979 to 77742500 521 - pseudogene predicted gene, 18596
Tssr98243 10 77742678 to 77742683 5 - TSS region transcription start site region 98243
Gm48178 10 77749494 to 77749580 86 - pseudogene predicted gene, 48178
Gm9736 10 77750521 to 77751354 833 - protein coding gene predicted gene 9736
Tssr98244 10 77751420 to 77751425 5 - TSS region transcription start site region 98244
Gm3233 10 77758990 to 77759682 692 - protein coding gene predicted gene 3233
Tssr98245 10 77767350 to 77767358 8 - TSS region transcription start site region 98245
Gm3238 10 77770633 to 77771325 692 - protein coding gene predicted gene 3238
Gm7138 10 77776252 to 77776944 692 - protein coding gene predicted gene 7138
Tssr98246 10 77777009 to 77777016 7 - TSS region transcription start site region 98246
Gm3250 10 77781850 to 77782542 692 - protein coding gene predicted gene 3250
Gm7137 10 77787490 to 77788200 710 - protein coding gene predicted gene 7137
Tssr3263 10 77788268 to 77788274 6 - TSS region transcription start site region 3263
Gm9639 10 77794399 to 77795076 677 - protein coding gene predicted gene 9639
Tssr98247 10 77795123 to 77795128 5 - TSS region transcription start site region 98247
D10Jhu50 10 77796449 to 77796779 330 DNA segment DNA segment, Chr 10, Johns Hopkins University 50
Gm19668 10 77798387 to 77799133 746 - protein coding gene predicted gene, 19668
Tssr98248 10 77799185 to 77799191 6 - TSS region transcription start site region 98248
Gm9507 10 77810967 to 77811843 876 - protein coding gene predicted gene 9507
Tssr98249 10 77811884 to 77811890 6 - TSS region transcription start site region 98249
Tssr94286 10 77814620 to 77814624 4 + TSS region transcription start site region 94286
Gm2696 10 77814682 to 77815404 722 + protein coding gene predicted gene 2696
Gm49918 10 77814682 to 77836652 21970 + protein coding gene predicted gene, 49918
D10Jhu49 10 77815740 to 77816003 263 DNA segment DNA segment, Chr 10, Johns Hopkins University 49
Krtap10-4 10 77826169 to 77827070 901 - protein coding gene keratin associated protein 10-4
Tssr98250 10 77827092 to 77827097 5 - TSS region transcription start site region 98250
Tssr94287 10 77835938 to 77835956 18 + TSS region transcription start site region 94287
Krtap10-10 10 77835947 to 77837251 1304 + protein coding gene keratin associated protein 10-10
Tssr94288 10 77836291 to 77836306 15 + TSS region transcription start site region 94288
Tssr94289 10 77837481 to 77837483 2 + TSS region transcription start site region 94289
Tssr94290 10 77837566 to 77837571 5 + TSS region transcription start site region 94290
Tssr94291 10 77837584 to 77837593 9 + TSS region transcription start site region 94291
Tssr94292 10 77837617 to 77837624 7 + TSS region transcription start site region 94292
Tssr94293 10 77837665 to 77837674 9 + TSS region transcription start site region 94293
Tssr94294 10 77837828 to 77837833 5 + TSS region transcription start site region 94294
Tssr94295 10 77838354 to 77838366 12 + TSS region transcription start site region 94295
Gm36176 10 77846803 to 77847303 500 + protein coding gene predicted gene, 36176
Tssr94296 10 77852810 to 77852816 6 + TSS region transcription start site region 94296
Gm10318 10 77852859 to 77853788 929 + protein coding gene predicted gene 10318
Tssr94297 10 77861951 to 77861956 5 + TSS region transcription start site region 94297
Gm3285 10 77861975 to 77862638 663 + protein coding gene predicted gene 3285
Tssr94298 10 77862262 to 77862280 18 + TSS region transcription start site region 94298
Tssr94299 10 77864607 to 77864643 36 + TSS region transcription start site region 94299
Cpgi1764 10 77864669 to 77864915 246 CpG island CpG island 1764
Tssr3264 10 77874574 to 77874577 3 + TSS region transcription start site region 3264
D10Jhu48 10 77878566 to 77878846 280 DNA segment DNA segment, Chr 10, Johns Hopkins University 48
Tssr3265 10 77880083 to 77880086 3 + TSS region transcription start site region 3265
Tssr94300 10 77893056 to 77893089 33 + TSS region transcription start site region 94300
Tssr94301 10 77893413 to 77893431 18 + TSS region transcription start site region 94301
1700009J07Rik 10 77893420 to 77896111 2691 + lincRNA gene RIKEN cDNA 1700009J07 gene
Tssr94302 10 77893435 to 77893442 7 + TSS region transcription start site region 94302
Lrrc3 10 77897575 to 77902536 4961 - protein coding gene leucine rich repeat containing 3
Tssr98251 10 77897913 to 77897931 18 - TSS region transcription start site region 98251
Cpgi1765 10 77901917 to 77903423 1506 CpG island CpG island 1765
Tssr98252 10 77902428 to 77902461 33 - TSS region transcription start site region 98252
Tssr98253 10 77902467 to 77902529 62 - TSS region transcription start site region 98253
Trpm2 10 77907722 to 77969911 62189 - protein coding gene transient receptor potential cation channel, subfamily M, member 2
Gm22394 10 77912636 to 77912711 75 - snoRNA gene predicted gene, 22394
Gm22871 10 77913798 to 77913851 53 - snoRNA gene predicted gene, 22871