Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:7742897-7842936

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Katna1 10 7726000 to 7763150 37150 + protein coding gene katanin p60 (ATPase-containing) subunit A1
Gm20470 10 7743520 to 7761099 17579 - unclassified non-coding RNA gene predicted gene 20470
Tssr92315 10 7753563 to 7753575 12 + TSS region transcription start site region 92315
Tssr92316 10 7758694 to 7758701 7 + TSS region transcription start site region 92316
Ginm1 10 7767947 to 7780948 13001 - protein coding gene glycoprotein integral membrane 1
Tssr96603 10 7768539 to 7768559 20 - TSS region transcription start site region 96603
B430219N15Rik 10 7780185 to 7781357 1172 + antisense lncRNA gene RIKEN cDNA B430219N15 gene
Cpgi1277 10 7780238 to 7781069 831 CpG island CpG island 1277
Tssr92317 10 7780265 to 7780277 12 + TSS region transcription start site region 92317
Tssr96604 10 7780866 to 7780923 57 - TSS region transcription start site region 96604
6530403G13Rik 10 7791404 to 7792831 1427 - lncRNA gene RIKEN cDNA 6530403G13 gene
Cpgi1278 10 7792519 to 7793449 930 CpG island CpG island 1278
Tssr96605 10 7792795 to 7792833 38 - TSS region transcription start site region 96605
Ppil4 10 7792883 to 7822565 29682 + protein coding gene peptidylprolyl isomerase (cyclophilin)-like 4
Tssr92318 10 7792897 to 7792936 39 + TSS region transcription start site region 92318
Tssr92319 10 7802974 to 7802978 4 + TSS region transcription start site region 92319
Gm15560 10 7808116 to 7808758 642 - pseudogene predicted gene 15560
Tssr92320 10 7810356 to 7810368 12 + TSS region transcription start site region 92320
Tssr96606 10 7824579 to 7824599 20 - TSS region transcription start site region 96606
Tssr92321 10 7824963 to 7824979 16 + TSS region transcription start site region 92321
Tssr92322 10 7832315 to 7832325 10 + TSS region transcription start site region 92322
Tssr92323 10 7832326 to 7832367 41 + TSS region transcription start site region 92323
Tssr92324 10 7832414 to 7832454 40 + TSS region transcription start site region 92324
Tssr92325 10 7832457 to 7832491 34 + TSS region transcription start site region 92325
Zc3h12d 10 7832470 to 7870396 37926 + protein coding gene zinc finger CCCH type containing 12D
Tssr92326 10 7832507 to 7832520 13 + TSS region transcription start site region 92326
Tssr96607 10 7833276 to 7833289 13 - TSS region transcription start site region 96607
Mir5104 10 7836381 to 7836474 93 + miRNA gene microRNA 5104
Tssr92327 10 7836468 to 7836487 19 + TSS region transcription start site region 92327
Tssr92328 10 7839687 to 7839712 25 + TSS region transcription start site region 92328