Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:7727883-7887565

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Katna1 10 7726000 to 7763150 37150 + protein coding gene katanin p60 (ATPase-containing) subunit A1
Gm20470 10 7743520 to 7761099 17579 - unclassified non-coding RNA gene predicted gene 20470
Tssr92315 10 7753563 to 7753575 12 + TSS region transcription start site region 92315
Tssr92316 10 7758694 to 7758701 7 + TSS region transcription start site region 92316
Ginm1 10 7767947 to 7780948 13001 - protein coding gene glycoprotein integral membrane 1
Tssr96603 10 7768539 to 7768559 20 - TSS region transcription start site region 96603
B430219N15Rik 10 7780185 to 7781357 1172 + antisense lncRNA gene RIKEN cDNA B430219N15 gene
Cpgi1277 10 7780238 to 7781069 831 CpG island CpG island 1277
Tssr92317 10 7780265 to 7780277 12 + TSS region transcription start site region 92317
Tssr96604 10 7780866 to 7780923 57 - TSS region transcription start site region 96604
6530403G13Rik 10 7791404 to 7792831 1427 - lncRNA gene RIKEN cDNA 6530403G13 gene
Cpgi1278 10 7792519 to 7793449 930 CpG island CpG island 1278
Tssr96605 10 7792795 to 7792833 38 - TSS region transcription start site region 96605
Ppil4 10 7792883 to 7822565 29682 + protein coding gene peptidylprolyl isomerase (cyclophilin)-like 4
Tssr92318 10 7792897 to 7792936 39 + TSS region transcription start site region 92318
Tssr92319 10 7802974 to 7802978 4 + TSS region transcription start site region 92319
Gm15560 10 7808116 to 7808758 642 - pseudogene predicted gene 15560
Tssr92320 10 7810356 to 7810368 12 + TSS region transcription start site region 92320
Tssr96606 10 7824579 to 7824599 20 - TSS region transcription start site region 96606
Tssr92321 10 7824963 to 7824979 16 + TSS region transcription start site region 92321
Tssr92322 10 7832315 to 7832325 10 + TSS region transcription start site region 92322
Tssr92323 10 7832326 to 7832367 41 + TSS region transcription start site region 92323
Tssr92324 10 7832414 to 7832454 40 + TSS region transcription start site region 92324
Tssr92325 10 7832457 to 7832491 34 + TSS region transcription start site region 92325
Zc3h12d 10 7832470 to 7870396 37926 + protein coding gene zinc finger CCCH type containing 12D
Tssr92326 10 7832507 to 7832520 13 + TSS region transcription start site region 92326
Tssr96607 10 7833276 to 7833289 13 - TSS region transcription start site region 96607
Mir5104 10 7836381 to 7836474 93 + miRNA gene microRNA 5104
Tssr92327 10 7836468 to 7836487 19 + TSS region transcription start site region 92327
Tssr92328 10 7839687 to 7839712 25 + TSS region transcription start site region 92328
Gm24726 10 7848361 to 7848481 120 - snoRNA gene predicted gene, 24726
Tssr92329 10 7858593 to 7858602 9 + TSS region transcription start site region 92329
Tssr92330 10 7862090 to 7862103 13 + TSS region transcription start site region 92330
Cpgi1279 10 7862287 to 7862652 365 CpG island CpG island 1279
Cpgi1280 10 7867119 to 7868168 1049 CpG island CpG island 1280
Tssr92331 10 7868873 to 7868878 5 + TSS region transcription start site region 92331