Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:77185243-77555254

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr94212 10 77191524 to 77191543 19 + TSS region transcription start site region 94212
Tssr94213 10 77196395 to 77196401 6 + TSS region transcription start site region 94213
Tssr94214 10 77197553 to 77197559 6 + TSS region transcription start site region 94214
Tssr98230 10 77199329 to 77199338 9 - TSS region transcription start site region 98230
Tssr98231 10 77201197 to 77201214 17 - TSS region transcription start site region 98231
Tssr94215 10 77202177 to 77202187 10 + TSS region transcription start site region 94215
Tssr94216 10 77202197 to 77202213 16 + TSS region transcription start site region 94216
D10Jhu60 10 77204849 to 77205123 274 DNA segment DNA segment, Chr 10, Johns Hopkins University 60
Gm35837 10 77206387 to 77243041 36654 + lncRNA gene predicted gene, 35837
Gm40704 10 77211020 to 77211935 915 + lncRNA gene predicted gene, 40704
Tssr98232 10 77211125 to 77211169 44 - TSS region transcription start site region 98232
Tssr3259 10 77215664 to 77215665 1 + TSS region transcription start site region 3259
D10Jhu59 10 77216484 to 77216911 427 DNA segment DNA segment, Chr 10, Johns Hopkins University 59
Tssr94217 10 77225709 to 77225717 8 + TSS region transcription start site region 94217
Tssr94218 10 77225719 to 77225729 10 + TSS region transcription start site region 94218
Tssr94219 10 77225922 to 77225971 49 + TSS region transcription start site region 94219
Gm40703 10 77250856 to 77252089 1233 - lncRNA gene predicted gene, 40703
Gm10941 10 77257776 to 77259223 1447 - bidirectional promoter lncRNA gene predicted gene 10941
Cpgi1755 10 77258724 to 77259949 1225 CpG island CpG island 1755
Pofut2 10 77259218 to 77269575 10357 + protein coding gene protein O-fucosyltransferase 2
Tssr94220 10 77259280 to 77259348 68 + TSS region transcription start site region 94220
Tssr94221 10 77259354 to 77259364 10 + TSS region transcription start site region 94221
Adarb1 10 77290726 to 77418270 127544 - protein coding gene adenosine deaminase, RNA-specific, B1
D10Bwg0424e 10 77316130 to 77316314 184 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0424 expressed
Tssr98233 10 77370243 to 77370254 11 - TSS region transcription start site region 98233
D10Jhu58 10 77399133 to 77399319 186 DNA segment DNA segment, Chr 10, Johns Hopkins University 58
D10Jhu56 10 77407245 to 77407474 229 DNA segment DNA segment, Chr 10, Johns Hopkins University 56
Tssr94222 10 77416259 to 77416265 6 + TSS region transcription start site region 94222
Cpgi1756 10 77416779 to 77418789 2010 CpG island CpG island 1756
Tssr98234 10 77418207 to 77418228 21 - TSS region transcription start site region 98234
Tssr98235 10 77418230 to 77418276 46 - TSS region transcription start site region 98235
Gm17769 10 77418376 to 77420939 2563 + lncRNA gene predicted gene, 17769
Tssr94223 10 77449085 to 77449090 5 + TSS region transcription start site region 94223
Gm35920 10 77457973 to 77470556 12583 + lincRNA gene predicted gene, 35920
Tssr94224 10 77457999 to 77458038 39 + TSS region transcription start site region 94224
Gm35983 10 77470595 to 77472464 1869 + lncRNA gene predicted gene, 35983
Fam207a 10 77486661 to 77515785 29124 - protein coding gene family with sequence similarity 207, member A
2810425M01Rik 10 77486664 to 77516430 29766 + lincRNA gene RIKEN cDNA 2810425M01 gene
Cpgi1757 10 77515170 to 77516249 1079 CpG island CpG island 1757
Tssr98236 10 77515775 to 77515818 43 - TSS region transcription start site region 98236
Tssr3260 10 77515819 to 77515826 7 - TSS region transcription start site region 3260
Tssr94225 10 77515892 to 77515909 17 + TSS region transcription start site region 94225
Gm36040 10 77521389 to 77522542 1153 + lncRNA gene predicted gene, 36040
Cpgi1758 10 77522406 to 77522676 270 CpG island CpG island 1758
Tssr98237 10 77530157 to 77530204 47 - TSS region transcription start site region 98237
Itgb2 10 77530329 to 77565681 35352 + protein coding gene integrin beta 2
Tssr94226 10 77530342 to 77530412 70 + TSS region transcription start site region 94226
Tssr94227 10 77530421 to 77530432 11 + TSS region transcription start site region 94227
Tssr94228 10 77530559 to 77530571 12 + TSS region transcription start site region 94228
Tssr94229 10 77530607 to 77530617 10 + TSS region transcription start site region 94229
Tssr94230 10 77530628 to 77530642 14 + TSS region transcription start site region 94230
Tssr94231 10 77535953 to 77535958 5 + TSS region transcription start site region 94231
Tssr3261 10 77537066 to 77537101 35 + TSS region transcription start site region 3261
Tssr94232 10 77541939 to 77541966 27 + TSS region transcription start site region 94232
D10Mit92 10 77544096 to 77544280 184 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 92
Tssr94233 10 77545148 to 77545229 81 + TSS region transcription start site region 94233
Tssr94234 10 77546026 to 77546035 9 + TSS region transcription start site region 94234
Tssr94235 10 77546108 to 77546119 11 + TSS region transcription start site region 94235
Tssr94236 10 77546139 to 77546157 18 + TSS region transcription start site region 94236
Tssr94237 10 77547151 to 77547187 36 + TSS region transcription start site region 94237
Tssr94238 10 77547239 to 77547258 19 + TSS region transcription start site region 94238
Tssr94239 10 77547821 to 77547829 8 + TSS region transcription start site region 94239
Tssr94240 10 77548546 to 77548567 21 + TSS region transcription start site region 94240
Tssr94241 10 77548624 to 77548636 12 + TSS region transcription start site region 94241
Tssr94242 10 77549633 to 77549650 17 + TSS region transcription start site region 94242
Tssr94243 10 77550488 to 77550507 19 + TSS region transcription start site region 94243
Tssr94244 10 77550885 to 77550916 31 + TSS region transcription start site region 94244
Tssr94245 10 77553855 to 77553878 23 + TSS region transcription start site region 94245
Tssr94246 10 77554033 to 77554045 12 + TSS region transcription start site region 94246