Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:77089354-77429364

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col18a1 10 77052178 to 77166530 114352 - protein coding gene collagen, type XVIII, alpha 1
Tssr98221 10 77089462 to 77089477 15 - TSS region transcription start site region 98221
Tssr98222 10 77112143 to 77112153 10 - TSS region transcription start site region 98222
Tssr98223 10 77113109 to 77113120 11 - TSS region transcription start site region 98223
Tssr98224 10 77113676 to 77113692 16 - TSS region transcription start site region 98224
Tssr98225 10 77113928 to 77113993 65 - TSS region transcription start site region 98225
Gm7775 10 77137100 to 77137952 852 + pseudogene predicted gene 7775
Tssr98226 10 77154331 to 77154335 4 - TSS region transcription start site region 98226
Cpgi1754 10 77165438 to 77166708 1270 CpG island CpG island 1754
Tssr98227 10 77166501 to 77166524 23 - TSS region transcription start site region 98227
Tssr98228 10 77166545 to 77166556 11 - TSS region transcription start site region 98228
Tssr94211 10 77166619 to 77166646 27 + TSS region transcription start site region 94211
Tssr98229 10 77182790 to 77182799 9 - TSS region transcription start site region 98229
Tssr94212 10 77191524 to 77191543 19 + TSS region transcription start site region 94212
Tssr94213 10 77196395 to 77196401 6 + TSS region transcription start site region 94213
Tssr94214 10 77197553 to 77197559 6 + TSS region transcription start site region 94214
Tssr98230 10 77199329 to 77199338 9 - TSS region transcription start site region 98230
Tssr98231 10 77201197 to 77201214 17 - TSS region transcription start site region 98231
Tssr94215 10 77202177 to 77202187 10 + TSS region transcription start site region 94215
Tssr94216 10 77202197 to 77202213 16 + TSS region transcription start site region 94216
D10Jhu60 10 77204849 to 77205123 274 DNA segment DNA segment, Chr 10, Johns Hopkins University 60
Gm35837 10 77206387 to 77243041 36654 + lncRNA gene predicted gene, 35837
Gm40704 10 77211020 to 77211935 915 + lncRNA gene predicted gene, 40704
Tssr98232 10 77211125 to 77211169 44 - TSS region transcription start site region 98232
Tssr3259 10 77215664 to 77215665 1 + TSS region transcription start site region 3259
D10Jhu59 10 77216484 to 77216911 427 DNA segment DNA segment, Chr 10, Johns Hopkins University 59
Tssr94217 10 77225709 to 77225717 8 + TSS region transcription start site region 94217
Tssr94218 10 77225719 to 77225729 10 + TSS region transcription start site region 94218
Tssr94219 10 77225922 to 77225971 49 + TSS region transcription start site region 94219
Gm40703 10 77250856 to 77252089 1233 - lncRNA gene predicted gene, 40703
Gm10941 10 77257776 to 77259223 1447 - bidirectional promoter lncRNA gene predicted gene 10941
Cpgi1755 10 77258724 to 77259949 1225 CpG island CpG island 1755
Pofut2 10 77259218 to 77269575 10357 + protein coding gene protein O-fucosyltransferase 2
Tssr94220 10 77259280 to 77259348 68 + TSS region transcription start site region 94220
Tssr94221 10 77259354 to 77259364 10 + TSS region transcription start site region 94221
Adarb1 10 77290726 to 77418270 127544 - protein coding gene adenosine deaminase, RNA-specific, B1
D10Bwg0424e 10 77316130 to 77316314 184 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0424 expressed
Tssr98233 10 77370243 to 77370254 11 - TSS region transcription start site region 98233
D10Jhu58 10 77399133 to 77399319 186 DNA segment DNA segment, Chr 10, Johns Hopkins University 58
D10Jhu56 10 77407245 to 77407474 229 DNA segment DNA segment, Chr 10, Johns Hopkins University 56
Tssr94222 10 77416259 to 77416265 6 + TSS region transcription start site region 94222
Cpgi1756 10 77416779 to 77418789 2010 CpG island CpG island 1756
Tssr98234 10 77418207 to 77418228 21 - TSS region transcription start site region 98234
Tssr98235 10 77418230 to 77418276 46 - TSS region transcription start site region 98235
Gm17769 10 77418376 to 77420939 2563 + lncRNA gene predicted gene, 17769