Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:76905922-77545971

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcbp3 10 76761857 to 76961887 200030 - protein coding gene poly(rC) binding protein 3
Tssr98212 10 76949311 to 76949316 5 - TSS region transcription start site region 98212
Cpgi1752 10 76961260 to 76962534 1274 CpG island CpG island 1752
Tssr98213 10 76961868 to 76961944 76 - TSS region transcription start site region 98213
Gm35664 10 76962141 to 76962602 461 + lncRNA gene predicted gene, 35664
Gm35721 10 76963936 to 76991410 27474 - lincRNA gene predicted gene, 35721
Gm37782 10 76983224 to 76983901 677 - unclassified gene predicted gene, 37782
Tssr98214 10 77008313 to 77008322 9 - TSS region transcription start site region 98214
Tssr3258 10 77008398 to 77008410 12 + TSS region transcription start site region 3258
Gm3137 10 77011501 to 77029575 18074 - lincRNA gene predicted gene, 3137
Tssr94202 10 77011984 to 77012005 21 + TSS region transcription start site region 94202
Gm10787 10 77011995 to 77022214 10219 + lincRNA gene predicted gene 10787
D10Jhu61 10 77013959 to 77014171 212 DNA segment DNA segment, Chr 10, Johns Hopkins University 61
Tssr98215 10 77029539 to 77029554 15 - TSS region transcription start site region 98215
Tssr94203 10 77032230 to 77032255 25 + TSS region transcription start site region 94203
Tssr94204 10 77032258 to 77032277 19 + TSS region transcription start site region 94204
Slc19a1 10 77032269 to 77050432 18163 + protein coding gene solute carrier family 19 (folate transporter), member 1
Cpgi1753 10 77032466 to 77033826 1360 CpG island CpG island 1753
Tssr94205 10 77032711 to 77032747 36 + TSS region transcription start site region 94205
Tssr94206 10 77033240 to 77033258 18 + TSS region transcription start site region 94206
Tssr94207 10 77033260 to 77033284 24 + TSS region transcription start site region 94207
Tssr94208 10 77033290 to 77033301 11 + TSS region transcription start site region 94208
Tssr94209 10 77033304 to 77033315 11 + TSS region transcription start site region 94209
Tssr94210 10 77035829 to 77035832 3 + TSS region transcription start site region 94210
Col18a1 10 77052178 to 77166530 114352 - protein coding gene collagen, type XVIII, alpha 1
Tssr98216 10 77055750 to 77055763 13 - TSS region transcription start site region 98216
Tssr98217 10 77059942 to 77059978 36 - TSS region transcription start site region 98217
Tssr98218 10 77085342 to 77085361 19 - TSS region transcription start site region 98218
Tssr98219 10 77085389 to 77085398 9 - TSS region transcription start site region 98219
Tssr98220 10 77088913 to 77088951 38 - TSS region transcription start site region 98220
Tssr98221 10 77089462 to 77089477 15 - TSS region transcription start site region 98221
Tssr98222 10 77112143 to 77112153 10 - TSS region transcription start site region 98222
Tssr98223 10 77113109 to 77113120 11 - TSS region transcription start site region 98223
Tssr98224 10 77113676 to 77113692 16 - TSS region transcription start site region 98224
Tssr98225 10 77113928 to 77113993 65 - TSS region transcription start site region 98225
Gm7775 10 77137100 to 77137952 852 + pseudogene predicted gene 7775
Tssr98226 10 77154331 to 77154335 4 - TSS region transcription start site region 98226
Cpgi1754 10 77165438 to 77166708 1270 CpG island CpG island 1754
Tssr98227 10 77166501 to 77166524 23 - TSS region transcription start site region 98227
Tssr98228 10 77166545 to 77166556 11 - TSS region transcription start site region 98228
Tssr94211 10 77166619 to 77166646 27 + TSS region transcription start site region 94211
Tssr98229 10 77182790 to 77182799 9 - TSS region transcription start site region 98229
Tssr94212 10 77191524 to 77191543 19 + TSS region transcription start site region 94212
Tssr94213 10 77196395 to 77196401 6 + TSS region transcription start site region 94213
Tssr94214 10 77197553 to 77197559 6 + TSS region transcription start site region 94214
Tssr98230 10 77199329 to 77199338 9 - TSS region transcription start site region 98230
Tssr98231 10 77201197 to 77201214 17 - TSS region transcription start site region 98231
Tssr94215 10 77202177 to 77202187 10 + TSS region transcription start site region 94215
Tssr94216 10 77202197 to 77202213 16 + TSS region transcription start site region 94216
D10Jhu60 10 77204849 to 77205123 274 DNA segment DNA segment, Chr 10, Johns Hopkins University 60
Gm35837 10 77206387 to 77243041 36654 + lncRNA gene predicted gene, 35837
Gm40704 10 77211020 to 77211935 915 + lncRNA gene predicted gene, 40704
Tssr98232 10 77211125 to 77211169 44 - TSS region transcription start site region 98232
Tssr3259 10 77215664 to 77215665 1 + TSS region transcription start site region 3259
D10Jhu59 10 77216484 to 77216911 427 DNA segment DNA segment, Chr 10, Johns Hopkins University 59
Tssr94217 10 77225709 to 77225717 8 + TSS region transcription start site region 94217
Tssr94218 10 77225719 to 77225729 10 + TSS region transcription start site region 94218
Tssr94219 10 77225922 to 77225971 49 + TSS region transcription start site region 94219
Gm40703 10 77250856 to 77252089 1233 - lncRNA gene predicted gene, 40703
Gm10941 10 77257776 to 77259223 1447 - bidirectional promoter lncRNA gene predicted gene 10941
Cpgi1755 10 77258724 to 77259949 1225 CpG island CpG island 1755
Pofut2 10 77259218 to 77269575 10357 + protein coding gene protein O-fucosyltransferase 2
Tssr94220 10 77259280 to 77259348 68 + TSS region transcription start site region 94220
Tssr94221 10 77259354 to 77259364 10 + TSS region transcription start site region 94221
Adarb1 10 77290726 to 77418270 127544 - protein coding gene adenosine deaminase, RNA-specific, B1
D10Bwg0424e 10 77316130 to 77316314 184 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0424 expressed
Tssr98233 10 77370243 to 77370254 11 - TSS region transcription start site region 98233
D10Jhu58 10 77399133 to 77399319 186 DNA segment DNA segment, Chr 10, Johns Hopkins University 58
D10Jhu56 10 77407245 to 77407474 229 DNA segment DNA segment, Chr 10, Johns Hopkins University 56
Tssr94222 10 77416259 to 77416265 6 + TSS region transcription start site region 94222
Cpgi1756 10 77416779 to 77418789 2010 CpG island CpG island 1756
Tssr98234 10 77418207 to 77418228 21 - TSS region transcription start site region 98234
Tssr98235 10 77418230 to 77418276 46 - TSS region transcription start site region 98235
Gm17769 10 77418376 to 77420939 2563 + lncRNA gene predicted gene, 17769
Tssr94223 10 77449085 to 77449090 5 + TSS region transcription start site region 94223
Gm35920 10 77457973 to 77470556 12583 + lincRNA gene predicted gene, 35920
Tssr94224 10 77457999 to 77458038 39 + TSS region transcription start site region 94224
Gm35983 10 77470595 to 77472464 1869 + lncRNA gene predicted gene, 35983
Fam207a 10 77486661 to 77515785 29124 - protein coding gene family with sequence similarity 207, member A
2810425M01Rik 10 77486664 to 77516430 29766 + lincRNA gene RIKEN cDNA 2810425M01 gene
Cpgi1757 10 77515170 to 77516249 1079 CpG island CpG island 1757
Tssr98236 10 77515775 to 77515818 43 - TSS region transcription start site region 98236
Tssr3260 10 77515819 to 77515826 7 - TSS region transcription start site region 3260
Tssr94225 10 77515892 to 77515909 17 + TSS region transcription start site region 94225
Gm36040 10 77521389 to 77522542 1153 + lncRNA gene predicted gene, 36040
Cpgi1758 10 77522406 to 77522676 270 CpG island CpG island 1758
Tssr98237 10 77530157 to 77530204 47 - TSS region transcription start site region 98237
Itgb2 10 77530329 to 77565681 35352 + protein coding gene integrin beta 2
Tssr94226 10 77530342 to 77530412 70 + TSS region transcription start site region 94226
Tssr94227 10 77530421 to 77530432 11 + TSS region transcription start site region 94227
Tssr94228 10 77530559 to 77530571 12 + TSS region transcription start site region 94228
Tssr94229 10 77530607 to 77530617 10 + TSS region transcription start site region 94229
Tssr94230 10 77530628 to 77530642 14 + TSS region transcription start site region 94230
Tssr94231 10 77535953 to 77535958 5 + TSS region transcription start site region 94231
Tssr3261 10 77537066 to 77537101 35 + TSS region transcription start site region 3261
Tssr94232 10 77541939 to 77541966 27 + TSS region transcription start site region 94232
D10Mit92 10 77544096 to 77544280 184 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 92
Tssr94233 10 77545148 to 77545229 81 + TSS region transcription start site region 94233