Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:76765342-77405361

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcbp3 10 76761857 to 76961887 200030 - protein coding gene poly(rC) binding protein 3
Tssr3257 10 76798852 to 76798865 13 - TSS region transcription start site region 3257
Tssr98208 10 76816717 to 76816734 17 - TSS region transcription start site region 98208
Tssr98209 10 76822818 to 76822831 13 - TSS region transcription start site region 98209
D10Mit242 10 76870978 to 76871089 111 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 242
Tssr98210 10 76874480 to 76874498 18 - TSS region transcription start site region 98210
Tssr98211 10 76884462 to 76884466 4 - TSS region transcription start site region 98211
Tssr98212 10 76949311 to 76949316 5 - TSS region transcription start site region 98212
Cpgi1752 10 76961260 to 76962534 1274 CpG island CpG island 1752
Tssr98213 10 76961868 to 76961944 76 - TSS region transcription start site region 98213
Gm35664 10 76962141 to 76962602 461 + lncRNA gene predicted gene, 35664
Gm35721 10 76963936 to 76991410 27474 - lincRNA gene predicted gene, 35721
Gm37782 10 76983224 to 76983901 677 - unclassified gene predicted gene, 37782
Tssr98214 10 77008313 to 77008322 9 - TSS region transcription start site region 98214
Tssr3258 10 77008398 to 77008410 12 + TSS region transcription start site region 3258
Gm3137 10 77011501 to 77029575 18074 - lincRNA gene predicted gene, 3137
Tssr94202 10 77011984 to 77012005 21 + TSS region transcription start site region 94202
Gm10787 10 77011995 to 77022214 10219 + lincRNA gene predicted gene 10787
D10Jhu61 10 77013959 to 77014171 212 DNA segment DNA segment, Chr 10, Johns Hopkins University 61
Tssr98215 10 77029539 to 77029554 15 - TSS region transcription start site region 98215
Tssr94203 10 77032230 to 77032255 25 + TSS region transcription start site region 94203
Tssr94204 10 77032258 to 77032277 19 + TSS region transcription start site region 94204
Slc19a1 10 77032269 to 77050432 18163 + protein coding gene solute carrier family 19 (folate transporter), member 1
Cpgi1753 10 77032466 to 77033826 1360 CpG island CpG island 1753
Tssr94205 10 77032711 to 77032747 36 + TSS region transcription start site region 94205
Tssr94206 10 77033240 to 77033258 18 + TSS region transcription start site region 94206
Tssr94207 10 77033260 to 77033284 24 + TSS region transcription start site region 94207
Tssr94208 10 77033290 to 77033301 11 + TSS region transcription start site region 94208
Tssr94209 10 77033304 to 77033315 11 + TSS region transcription start site region 94209
Tssr94210 10 77035829 to 77035832 3 + TSS region transcription start site region 94210
Col18a1 10 77052178 to 77166530 114352 - protein coding gene collagen, type XVIII, alpha 1
Tssr98216 10 77055750 to 77055763 13 - TSS region transcription start site region 98216
Tssr98217 10 77059942 to 77059978 36 - TSS region transcription start site region 98217
Tssr98218 10 77085342 to 77085361 19 - TSS region transcription start site region 98218
Tssr98219 10 77085389 to 77085398 9 - TSS region transcription start site region 98219
Tssr98220 10 77088913 to 77088951 38 - TSS region transcription start site region 98220
Tssr98221 10 77089462 to 77089477 15 - TSS region transcription start site region 98221
Tssr98222 10 77112143 to 77112153 10 - TSS region transcription start site region 98222
Tssr98223 10 77113109 to 77113120 11 - TSS region transcription start site region 98223
Tssr98224 10 77113676 to 77113692 16 - TSS region transcription start site region 98224
Tssr98225 10 77113928 to 77113993 65 - TSS region transcription start site region 98225
Gm7775 10 77137100 to 77137952 852 + pseudogene predicted gene 7775
Tssr98226 10 77154331 to 77154335 4 - TSS region transcription start site region 98226
Cpgi1754 10 77165438 to 77166708 1270 CpG island CpG island 1754
Tssr98227 10 77166501 to 77166524 23 - TSS region transcription start site region 98227
Tssr98228 10 77166545 to 77166556 11 - TSS region transcription start site region 98228
Tssr94211 10 77166619 to 77166646 27 + TSS region transcription start site region 94211
Tssr98229 10 77182790 to 77182799 9 - TSS region transcription start site region 98229
Tssr94212 10 77191524 to 77191543 19 + TSS region transcription start site region 94212
Tssr94213 10 77196395 to 77196401 6 + TSS region transcription start site region 94213
Tssr94214 10 77197553 to 77197559 6 + TSS region transcription start site region 94214
Tssr98230 10 77199329 to 77199338 9 - TSS region transcription start site region 98230
Tssr98231 10 77201197 to 77201214 17 - TSS region transcription start site region 98231
Tssr94215 10 77202177 to 77202187 10 + TSS region transcription start site region 94215
Tssr94216 10 77202197 to 77202213 16 + TSS region transcription start site region 94216
D10Jhu60 10 77204849 to 77205123 274 DNA segment DNA segment, Chr 10, Johns Hopkins University 60
Gm35837 10 77206387 to 77243041 36654 + lncRNA gene predicted gene, 35837
Gm40704 10 77211020 to 77211935 915 + lncRNA gene predicted gene, 40704
Tssr98232 10 77211125 to 77211169 44 - TSS region transcription start site region 98232
Tssr3259 10 77215664 to 77215665 1 + TSS region transcription start site region 3259
D10Jhu59 10 77216484 to 77216911 427 DNA segment DNA segment, Chr 10, Johns Hopkins University 59
Tssr94217 10 77225709 to 77225717 8 + TSS region transcription start site region 94217
Tssr94218 10 77225719 to 77225729 10 + TSS region transcription start site region 94218
Tssr94219 10 77225922 to 77225971 49 + TSS region transcription start site region 94219
Gm40703 10 77250856 to 77252089 1233 - lncRNA gene predicted gene, 40703
Gm10941 10 77257776 to 77259223 1447 - bidirectional promoter lncRNA gene predicted gene 10941
Cpgi1755 10 77258724 to 77259949 1225 CpG island CpG island 1755
Pofut2 10 77259218 to 77269575 10357 + protein coding gene protein O-fucosyltransferase 2
Tssr94220 10 77259280 to 77259348 68 + TSS region transcription start site region 94220
Tssr94221 10 77259354 to 77259364 10 + TSS region transcription start site region 94221
Adarb1 10 77290726 to 77418270 127544 - protein coding gene adenosine deaminase, RNA-specific, B1
D10Bwg0424e 10 77316130 to 77316314 184 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0424 expressed
Tssr98233 10 77370243 to 77370254 11 - TSS region transcription start site region 98233
D10Jhu58 10 77399133 to 77399319 186 DNA segment DNA segment, Chr 10, Johns Hopkins University 58