Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:7665997-7786014

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcmt1 10 7629373 to 7681136 51763 - protein coding gene protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
Cpgi1274 10 7667394 to 7667858 464 CpG island CpG island 1274
Nup43 10 7667503 to 7678881 11378 + protein coding gene nucleoporin 43
Tssr92307 10 7667506 to 7667558 52 + TSS region transcription start site region 92307
BC020402 10 7678971 to 7681158 2187 - lncRNA gene cDNA sequence BC020402
Cpgi1275 10 7680531 to 7681939 1408 CpG island CpG island 1275
Tssr92308 10 7680918 to 7681025 107 + TSS region transcription start site region 92308
Tssr96602 10 7681118 to 7681163 45 - TSS region transcription start site region 96602
Tssr92309 10 7681185 to 7681196 11 + TSS region transcription start site region 92309
Tssr92310 10 7681197 to 7681225 28 + TSS region transcription start site region 92310
Lats1 10 7681214 to 7716460 35246 + protein coding gene large tumor suppressor
Tssr92311 10 7709032 to 7709070 38 + TSS region transcription start site region 92311
Cpgi1276 10 7725810 to 7726414 604 CpG island CpG island 1276
Tssr92312 10 7725997 to 7726014 17 + TSS region transcription start site region 92312
Katna1 10 7726000 to 7763150 37150 + protein coding gene katanin p60 (ATPase-containing) subunit A1
Tssr92313 10 7726061 to 7726083 22 + TSS region transcription start site region 92313
Tssr92314 10 7726681 to 7726694 13 + TSS region transcription start site region 92314
Gm20470 10 7743520 to 7761099 17579 - unclassified non-coding RNA gene predicted gene 20470
Tssr92315 10 7753563 to 7753575 12 + TSS region transcription start site region 92315
Tssr92316 10 7758694 to 7758701 7 + TSS region transcription start site region 92316
Ginm1 10 7767947 to 7780948 13001 - protein coding gene glycoprotein integral membrane 1
Tssr96603 10 7768539 to 7768559 20 - TSS region transcription start site region 96603
B430219N15Rik 10 7780185 to 7781357 1172 + antisense lncRNA gene RIKEN cDNA B430219N15 gene
Cpgi1277 10 7780238 to 7781069 831 CpG island CpG island 1277
Tssr92317 10 7780265 to 7780277 12 + TSS region transcription start site region 92317
Tssr96604 10 7780866 to 7780923 57 - TSS region transcription start site region 96604