Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:76508852-77088865

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 complex/cluster/region deletion, Chr10, Yann Herault 1
Mcm3ap 10 76468971 to 76515859 46888 + protein coding gene minichromosome maintenance complex component 3 associated protein
Cpgi1747 10 76531080 to 76532020 940 CpG island CpG island 1747
Lss 10 76531588 to 76557138 25550 + protein coding gene lanosterol synthase
Tssr94186 10 76531593 to 76531635 42 + TSS region transcription start site region 94186
Tssr94187 10 76531637 to 76531657 20 + TSS region transcription start site region 94187
4930483K19Rik 10 76545871 to 76562226 16355 - antisense lncRNA gene RIKEN cDNA 4930483K19 gene
Tssr94188 10 76562256 to 76562267 11 + TSS region transcription start site region 94188
Tssr94189 10 76562270 to 76562328 58 + TSS region transcription start site region 94189
Spatc1l 10 76562272 to 76570201 7929 + protein coding gene spermatogenesis and centriole associated 1 like
Gm15343 10 76564765 to 76570532 5767 - antisense lncRNA gene predicted gene 15343
Cpgi1748 10 76569600 to 76570154 554 CpG island CpG island 1748
Tssr98179 10 76570433 to 76570455 22 - TSS region transcription start site region 98179
Tssr94190 10 76575640 to 76575656 16 + TSS region transcription start site region 94190
Ftcd 10 76575648 to 76590338 14690 + protein coding gene formiminotransferase cyclodeaminase
Tssr94191 10 76576398 to 76576419 21 + TSS region transcription start site region 94191
Tssr94192 10 76581535 to 76581546 11 + TSS region transcription start site region 94192
Tssr94193 10 76583875 to 76583882 7 + TSS region transcription start site region 94193
Tssr94194 10 76583892 to 76583900 8 + TSS region transcription start site region 94194
Col6a2 10 76595762 to 76623630 27868 - protein coding gene collagen, type VI, alpha 2
Tssr98180 10 76595919 to 76595945 26 - TSS region transcription start site region 98180
Tssr94195 10 76595965 to 76596010 45 + TSS region transcription start site region 94195
Tssr98181 10 76596018 to 76596090 72 - TSS region transcription start site region 98181
Tssr98182 10 76596156 to 76596181 25 - TSS region transcription start site region 98182
Cpgi1749 10 76596182 to 76596805 623 CpG island CpG island 1749
Tssr98183 10 76596385 to 76596402 17 - TSS region transcription start site region 98183
Tssr98184 10 76596450 to 76596484 34 - TSS region transcription start site region 98184
Tssr98185 10 76596658 to 76596675 17 - TSS region transcription start site region 98185
Tssr98186 10 76599333 to 76599381 48 - TSS region transcription start site region 98186
Tssr98187 10 76599411 to 76599429 18 - TSS region transcription start site region 98187
Tssr98188 10 76599706 to 76599718 12 - TSS region transcription start site region 98188
Tssr98189 10 76611821 to 76611843 22 - TSS region transcription start site region 98189
Tssr98190 10 76614405 to 76614453 48 - TSS region transcription start site region 98190
Tssr98191 10 76614490 to 76614506 16 - TSS region transcription start site region 98191
Tssr98192 10 76614588 to 76614597 9 - TSS region transcription start site region 98192
Tssr98193 10 76614751 to 76614772 21 - TSS region transcription start site region 98193
Tssr94196 10 76615036 to 76615070 34 + TSS region transcription start site region 94196
Cpgi1750 10 76623266 to 76623590 324 CpG island CpG island 1750
Tssr98194 10 76623318 to 76623332 14 - TSS region transcription start site region 98194
Gm35608 10 76684432 to 76686801 2369 + lincRNA gene predicted gene, 35608
Col6a1 10 76708792 to 76726044 17252 - protein coding gene collagen, type VI, alpha 1
Tssr98195 10 76709102 to 76709119 17 - TSS region transcription start site region 98195
Tssr98196 10 76709298 to 76709356 58 - TSS region transcription start site region 98196
Tssr98197 10 76709491 to 76709511 20 - TSS region transcription start site region 98197
Tssr98198 10 76709535 to 76709581 46 - TSS region transcription start site region 98198
Tssr98199 10 76709642 to 76709666 24 - TSS region transcription start site region 98199
Tssr98200 10 76709683 to 76709733 50 - TSS region transcription start site region 98200
Tssr98201 10 76711652 to 76711663 11 - TSS region transcription start site region 98201
Tssr94197 10 76716252 to 76716299 47 + TSS region transcription start site region 94197
Tssr94198 10 76717252 to 76717288 36 + TSS region transcription start site region 94198
Tssr98202 10 76719145 to 76719167 22 - TSS region transcription start site region 98202
Tssr98203 10 76721456 to 76721473 17 - TSS region transcription start site region 98203
Tssr94199 10 76721836 to 76721899 63 + TSS region transcription start site region 94199
Tssr94200 10 76721912 to 76721934 22 + TSS region transcription start site region 94200
Tssr98204 10 76721966 to 76721981 15 - TSS region transcription start site region 98204
Cpgi1751 10 76723342 to 76723626 284 CpG island CpG island 1751
Tssr98205 10 76723418 to 76723439 21 - TSS region transcription start site region 98205
Tssr98206 10 76723461 to 76723517 56 - TSS region transcription start site region 98206
Tssr94201 10 76723488 to 76723512 24 + TSS region transcription start site region 94201
Tssr3254 10 76725941 to 76725952 11 - TSS region transcription start site region 3254
Tssr98207 10 76725978 to 76726050 72 - TSS region transcription start site region 98207
Tssr3255 10 76726198 to 76726245 47 - TSS region transcription start site region 3255
Tssr3256 10 76726247 to 76726286 39 - TSS region transcription start site region 3256
Gm48276 10 76726583 to 76730273 3690 - lincRNA gene predicted gene, 48276
Pcbp3 10 76761857 to 76961887 200030 - protein coding gene poly(rC) binding protein 3
Tssr3257 10 76798852 to 76798865 13 - TSS region transcription start site region 3257
Tssr98208 10 76816717 to 76816734 17 - TSS region transcription start site region 98208
Tssr98209 10 76822818 to 76822831 13 - TSS region transcription start site region 98209
D10Mit242 10 76870978 to 76871089 111 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 242
Tssr98210 10 76874480 to 76874498 18 - TSS region transcription start site region 98210
Tssr98211 10 76884462 to 76884466 4 - TSS region transcription start site region 98211
Tssr98212 10 76949311 to 76949316 5 - TSS region transcription start site region 98212
Cpgi1752 10 76961260 to 76962534 1274 CpG island CpG island 1752
Tssr98213 10 76961868 to 76961944 76 - TSS region transcription start site region 98213
Gm35664 10 76962141 to 76962602 461 + lncRNA gene predicted gene, 35664
Gm35721 10 76963936 to 76991410 27474 - lincRNA gene predicted gene, 35721
Gm37782 10 76983224 to 76983901 677 - unclassified gene predicted gene, 37782
Tssr98214 10 77008313 to 77008322 9 - TSS region transcription start site region 98214
Tssr3258 10 77008398 to 77008410 12 + TSS region transcription start site region 3258
Gm3137 10 77011501 to 77029575 18074 - lincRNA gene predicted gene, 3137
Tssr94202 10 77011984 to 77012005 21 + TSS region transcription start site region 94202
Gm10787 10 77011995 to 77022214 10219 + lincRNA gene predicted gene 10787
D10Jhu61 10 77013959 to 77014171 212 DNA segment DNA segment, Chr 10, Johns Hopkins University 61
Tssr98215 10 77029539 to 77029554 15 - TSS region transcription start site region 98215
Tssr94203 10 77032230 to 77032255 25 + TSS region transcription start site region 94203
Tssr94204 10 77032258 to 77032277 19 + TSS region transcription start site region 94204
Slc19a1 10 77032269 to 77050432 18163 + protein coding gene solute carrier family 19 (folate transporter), member 1
Cpgi1753 10 77032466 to 77033826 1360 CpG island CpG island 1753
Tssr94205 10 77032711 to 77032747 36 + TSS region transcription start site region 94205
Tssr94206 10 77033240 to 77033258 18 + TSS region transcription start site region 94206
Tssr94207 10 77033260 to 77033284 24 + TSS region transcription start site region 94207
Tssr94208 10 77033290 to 77033301 11 + TSS region transcription start site region 94208
Tssr94209 10 77033304 to 77033315 11 + TSS region transcription start site region 94209
Tssr94210 10 77035829 to 77035832 3 + TSS region transcription start site region 94210
Col18a1 10 77052178 to 77166530 114352 - protein coding gene collagen, type XVIII, alpha 1
Tssr98216 10 77055750 to 77055763 13 - TSS region transcription start site region 98216
Tssr98217 10 77059942 to 77059978 36 - TSS region transcription start site region 98217
Tssr98218 10 77085342 to 77085361 19 - TSS region transcription start site region 98218
Tssr98219 10 77085389 to 77085398 9 - TSS region transcription start site region 98219