Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:76183461-77263517

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191 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc5a4a 10 76147451 to 76189265 41814 + protein coding gene solute carrier family 5, member 4a
Gm2628 10 76198194 to 76198981 787 - pseudogene predicted gene 2628
Cpgi1741 10 76203664 to 76203966 302 CpG island CpG island 1741
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 complex/cluster/region deletion, Chr10, Yann Herault 1
Prmt2 10 76207226 to 76237865 30639 - protein coding gene protein arginine N-methyltransferase 2
Dp(10Prmt2-Pdxk)2Yey 10 76207226 to 78464948 2257722 chromosomal duplication duplication, Chr 10, Y Eugene Yu 2
Del(10Prmt2-Pdxk)4Yey 10 76207226 to 78464948 2257722 chromosomal deletion deletion, Chr 10, Y Eugene Yu 4
Del(10Prmt2-Cstb)4Yah 10 76207226 to 78427622 2220396 complex/cluster/region deletion, Chr10, Yann Herault 4
Mir678 10 76207326 to 76207409 83 - miRNA gene microRNA 678
Cpgi1742 10 76237445 to 76238255 810 CpG island CpG island 1742
Tssr98166 10 76237789 to 76237796 7 - TSS region transcription start site region 98166
Tssr98167 10 76237822 to 76237867 45 - TSS region transcription start site region 98167
Tssr3252 10 76253817 to 76253822 5 + TSS region transcription start site region 3252
Tssr94168 10 76253848 to 76253866 18 + TSS region transcription start site region 94168
S100b 10 76253853 to 76261159 7306 + protein coding gene S100 protein, beta polypeptide, neural
Tssr94169 10 76253899 to 76253915 16 + TSS region transcription start site region 94169
Dip2a 10 76263049 to 76345291 82242 - protein coding gene disco interacting protein 2 homolog A
Tssr94170 10 76293148 to 76293163 15 + TSS region transcription start site region 94170
Gm16240 10 76293165 to 76294860 1695 + antisense lncRNA gene predicted gene 16240
Cpgi1743 10 76344482 to 76345701 1219 CpG island CpG island 1743
Tssr98168 10 76345254 to 76345371 117 - TSS region transcription start site region 98168
Gm40699 10 76345381 to 76347257 1876 + lncRNA gene predicted gene, 40699
Tssr94171 10 76345442 to 76345457 15 + TSS region transcription start site region 94171
Pcnt 10 76351263 to 76442786 91523 - protein coding gene pericentrin (kendrin)
Cpgi1744 10 76354821 to 76355083 262 CpG island CpG island 1744
Tssr98169 10 76388715 to 76388718 3 - TSS region transcription start site region 98169
Tssr94172 10 76388837 to 76388847 10 + TSS region transcription start site region 94172
Tssr98170 10 76388878 to 76388906 28 - TSS region transcription start site region 98170
1700094J05Rik 10 76389015 to 76401507 12492 + antisense lncRNA gene RIKEN cDNA 1700094J05 gene
D10Jhu19 10 76400690 to 76400905 215 DNA segment DNA segment, Chr 10, Johns Hopkins University 19
D10Jhu63 10 76415389 to 76415769 380 DNA segment DNA segment, Chr 10, Johns Hopkins University 63
Tssr98171 10 76416781 to 76416804 23 - TSS region transcription start site region 98171
Tssr98172 10 76416860 to 76416876 16 - TSS region transcription start site region 98172
Tssr98173 10 76425451 to 76425454 3 - TSS region transcription start site region 98173
Cpgi1745 10 76442225 to 76443364 1139 CpG island CpG island 1745
Tssr3253 10 76442239 to 76442281 42 - TSS region transcription start site region 3253
Tssr94173 10 76442368 to 76442393 25 + TSS region transcription start site region 94173
Gm9744 10 76442371 to 76443867 1496 protein coding gene predicted gene 9744
Tssr94174 10 76442416 to 76442425 9 + TSS region transcription start site region 94174
Tssr98174 10 76442649 to 76442672 23 - TSS region transcription start site region 98174
Tssr98175 10 76442679 to 76442697 18 - TSS region transcription start site region 98175
Tssr98176 10 76442734 to 76442756 22 - TSS region transcription start site region 98176
Tssr98177 10 76442758 to 76442813 55 - TSS region transcription start site region 98177
Tssr94175 10 76447379 to 76447386 7 + TSS region transcription start site region 94175
Tssr94176 10 76449057 to 76449068 11 + TSS region transcription start site region 94176
Tssr94177 10 76449074 to 76449093 19 + TSS region transcription start site region 94177
2610028H24Rik 10 76449081 to 76461110 12029 + protein coding gene RIKEN cDNA 2610028H24 gene
Tssr94178 10 76449095 to 76449109 14 + TSS region transcription start site region 94178
Tssr94179 10 76449121 to 76449135 14 + TSS region transcription start site region 94179
Tssr94180 10 76452911 to 76452914 3 + TSS region transcription start site region 94180
Ybey 10 76459567 to 76469114 9547 - protein coding gene ybeY metallopeptidase
Cpgi1746 10 76468563 to 76469149 586 CpG island CpG island 1746
Tssr98178 10 76468811 to 76468868 57 - TSS region transcription start site region 98178
Tssr94181 10 76468866 to 76468993 127 + TSS region transcription start site region 94181
Mcm3ap 10 76468971 to 76515859 46888 + protein coding gene minichromosome maintenance complex component 3 associated protein
Tssr94182 10 76469076 to 76469086 10 + TSS region transcription start site region 94182
Tssr94183 10 76481032 to 76481042 10 + TSS region transcription start site region 94183
Tssr94184 10 76481050 to 76481094 44 + TSS region transcription start site region 94184
Tssr94185 10 76481101 to 76481127 26 + TSS region transcription start site region 94185
Cpgi1747 10 76531080 to 76532020 940 CpG island CpG island 1747
Lss 10 76531588 to 76557138 25550 + protein coding gene lanosterol synthase
Tssr94186 10 76531593 to 76531635 42 + TSS region transcription start site region 94186
Tssr94187 10 76531637 to 76531657 20 + TSS region transcription start site region 94187
4930483K19Rik 10 76545871 to 76562226 16355 - antisense lncRNA gene RIKEN cDNA 4930483K19 gene
Tssr94188 10 76562256 to 76562267 11 + TSS region transcription start site region 94188
Tssr94189 10 76562270 to 76562328 58 + TSS region transcription start site region 94189
Spatc1l 10 76562272 to 76570201 7929 + protein coding gene spermatogenesis and centriole associated 1 like
Gm15343 10 76564765 to 76570532 5767 - antisense lncRNA gene predicted gene 15343
Cpgi1748 10 76569600 to 76570154 554 CpG island CpG island 1748
Tssr98179 10 76570433 to 76570455 22 - TSS region transcription start site region 98179
Tssr94190 10 76575640 to 76575656 16 + TSS region transcription start site region 94190
Ftcd 10 76575648 to 76590338 14690 + protein coding gene formiminotransferase cyclodeaminase
Tssr94191 10 76576398 to 76576419 21 + TSS region transcription start site region 94191
Tssr94192 10 76581535 to 76581546 11 + TSS region transcription start site region 94192
Tssr94193 10 76583875 to 76583882 7 + TSS region transcription start site region 94193
Tssr94194 10 76583892 to 76583900 8 + TSS region transcription start site region 94194
Col6a2 10 76595762 to 76623630 27868 - protein coding gene collagen, type VI, alpha 2
Tssr98180 10 76595919 to 76595945 26 - TSS region transcription start site region 98180
Tssr94195 10 76595965 to 76596010 45 + TSS region transcription start site region 94195
Tssr98181 10 76596018 to 76596090 72 - TSS region transcription start site region 98181
Tssr98182 10 76596156 to 76596181 25 - TSS region transcription start site region 98182
Cpgi1749 10 76596182 to 76596805 623 CpG island CpG island 1749
Tssr98183 10 76596385 to 76596402 17 - TSS region transcription start site region 98183
Tssr98184 10 76596450 to 76596484 34 - TSS region transcription start site region 98184
Tssr98185 10 76596658 to 76596675 17 - TSS region transcription start site region 98185
Tssr98186 10 76599333 to 76599381 48 - TSS region transcription start site region 98186
Tssr98187 10 76599411 to 76599429 18 - TSS region transcription start site region 98187
Tssr98188 10 76599706 to 76599718 12 - TSS region transcription start site region 98188
Tssr98189 10 76611821 to 76611843 22 - TSS region transcription start site region 98189
Tssr98190 10 76614405 to 76614453 48 - TSS region transcription start site region 98190
Tssr98191 10 76614490 to 76614506 16 - TSS region transcription start site region 98191
Tssr98192 10 76614588 to 76614597 9 - TSS region transcription start site region 98192
Tssr98193 10 76614751 to 76614772 21 - TSS region transcription start site region 98193
Tssr94196 10 76615036 to 76615070 34 + TSS region transcription start site region 94196
Cpgi1750 10 76623266 to 76623590 324 CpG island CpG island 1750
Tssr98194 10 76623318 to 76623332 14 - TSS region transcription start site region 98194
Gm35608 10 76684432 to 76686801 2369 + lincRNA gene predicted gene, 35608
Col6a1 10 76708792 to 76726044 17252 - protein coding gene collagen, type VI, alpha 1
Tssr98195 10 76709102 to 76709119 17 - TSS region transcription start site region 98195
Tssr98196 10 76709298 to 76709356 58 - TSS region transcription start site region 98196
Tssr98197 10 76709491 to 76709511 20 - TSS region transcription start site region 98197
Tssr98198 10 76709535 to 76709581 46 - TSS region transcription start site region 98198
Tssr98199 10 76709642 to 76709666 24 - TSS region transcription start site region 98199
Tssr98200 10 76709683 to 76709733 50 - TSS region transcription start site region 98200
Tssr98201 10 76711652 to 76711663 11 - TSS region transcription start site region 98201
Tssr94197 10 76716252 to 76716299 47 + TSS region transcription start site region 94197
Tssr94198 10 76717252 to 76717288 36 + TSS region transcription start site region 94198
Tssr98202 10 76719145 to 76719167 22 - TSS region transcription start site region 98202
Tssr98203 10 76721456 to 76721473 17 - TSS region transcription start site region 98203
Tssr94199 10 76721836 to 76721899 63 + TSS region transcription start site region 94199
Tssr94200 10 76721912 to 76721934 22 + TSS region transcription start site region 94200
Tssr98204 10 76721966 to 76721981 15 - TSS region transcription start site region 98204
Cpgi1751 10 76723342 to 76723626 284 CpG island CpG island 1751
Tssr98205 10 76723418 to 76723439 21 - TSS region transcription start site region 98205
Tssr98206 10 76723461 to 76723517 56 - TSS region transcription start site region 98206
Tssr94201 10 76723488 to 76723512 24 + TSS region transcription start site region 94201
Tssr3254 10 76725941 to 76725952 11 - TSS region transcription start site region 3254
Tssr98207 10 76725978 to 76726050 72 - TSS region transcription start site region 98207
Tssr3255 10 76726198 to 76726245 47 - TSS region transcription start site region 3255
Tssr3256 10 76726247 to 76726286 39 - TSS region transcription start site region 3256
Gm48276 10 76726583 to 76730273 3690 - lincRNA gene predicted gene, 48276
Pcbp3 10 76761857 to 76961887 200030 - protein coding gene poly(rC) binding protein 3
Tssr3257 10 76798852 to 76798865 13 - TSS region transcription start site region 3257
Tssr98208 10 76816717 to 76816734 17 - TSS region transcription start site region 98208
Tssr98209 10 76822818 to 76822831 13 - TSS region transcription start site region 98209
D10Mit242 10 76870978 to 76871089 111 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 242
Tssr98210 10 76874480 to 76874498 18 - TSS region transcription start site region 98210
Tssr98211 10 76884462 to 76884466 4 - TSS region transcription start site region 98211
Tssr98212 10 76949311 to 76949316 5 - TSS region transcription start site region 98212
Cpgi1752 10 76961260 to 76962534 1274 CpG island CpG island 1752
Tssr98213 10 76961868 to 76961944 76 - TSS region transcription start site region 98213
Gm35664 10 76962141 to 76962602 461 + lncRNA gene predicted gene, 35664
Gm35721 10 76963936 to 76991410 27474 - lincRNA gene predicted gene, 35721
Gm37782 10 76983224 to 76983901 677 - unclassified gene predicted gene, 37782
Tssr98214 10 77008313 to 77008322 9 - TSS region transcription start site region 98214
Tssr3258 10 77008398 to 77008410 12 + TSS region transcription start site region 3258
Gm3137 10 77011501 to 77029575 18074 - lincRNA gene predicted gene, 3137
Tssr94202 10 77011984 to 77012005 21 + TSS region transcription start site region 94202
Gm10787 10 77011995 to 77022214 10219 + lincRNA gene predicted gene 10787
D10Jhu61 10 77013959 to 77014171 212 DNA segment DNA segment, Chr 10, Johns Hopkins University 61
Tssr98215 10 77029539 to 77029554 15 - TSS region transcription start site region 98215
Tssr94203 10 77032230 to 77032255 25 + TSS region transcription start site region 94203
Tssr94204 10 77032258 to 77032277 19 + TSS region transcription start site region 94204
Slc19a1 10 77032269 to 77050432 18163 + protein coding gene solute carrier family 19 (folate transporter), member 1
Cpgi1753 10 77032466 to 77033826 1360 CpG island CpG island 1753
Tssr94205 10 77032711 to 77032747 36 + TSS region transcription start site region 94205
Tssr94206 10 77033240 to 77033258 18 + TSS region transcription start site region 94206
Tssr94207 10 77033260 to 77033284 24 + TSS region transcription start site region 94207
Tssr94208 10 77033290 to 77033301 11 + TSS region transcription start site region 94208
Tssr94209 10 77033304 to 77033315 11 + TSS region transcription start site region 94209
Tssr94210 10 77035829 to 77035832 3 + TSS region transcription start site region 94210
Col18a1 10 77052178 to 77166530 114352 - protein coding gene collagen, type XVIII, alpha 1
Tssr98216 10 77055750 to 77055763 13 - TSS region transcription start site region 98216
Tssr98217 10 77059942 to 77059978 36 - TSS region transcription start site region 98217
Tssr98218 10 77085342 to 77085361 19 - TSS region transcription start site region 98218
Tssr98219 10 77085389 to 77085398 9 - TSS region transcription start site region 98219
Tssr98220 10 77088913 to 77088951 38 - TSS region transcription start site region 98220
Tssr98221 10 77089462 to 77089477 15 - TSS region transcription start site region 98221
Tssr98222 10 77112143 to 77112153 10 - TSS region transcription start site region 98222
Tssr98223 10 77113109 to 77113120 11 - TSS region transcription start site region 98223
Tssr98224 10 77113676 to 77113692 16 - TSS region transcription start site region 98224
Tssr98225 10 77113928 to 77113993 65 - TSS region transcription start site region 98225
Gm7775 10 77137100 to 77137952 852 + pseudogene predicted gene 7775
Tssr98226 10 77154331 to 77154335 4 - TSS region transcription start site region 98226
Cpgi1754 10 77165438 to 77166708 1270 CpG island CpG island 1754
Tssr98227 10 77166501 to 77166524 23 - TSS region transcription start site region 98227
Tssr98228 10 77166545 to 77166556 11 - TSS region transcription start site region 98228
Tssr94211 10 77166619 to 77166646 27 + TSS region transcription start site region 94211
Tssr98229 10 77182790 to 77182799 9 - TSS region transcription start site region 98229
Tssr94212 10 77191524 to 77191543 19 + TSS region transcription start site region 94212
Tssr94213 10 77196395 to 77196401 6 + TSS region transcription start site region 94213
Tssr94214 10 77197553 to 77197559 6 + TSS region transcription start site region 94214
Tssr98230 10 77199329 to 77199338 9 - TSS region transcription start site region 98230
Tssr98231 10 77201197 to 77201214 17 - TSS region transcription start site region 98231
Tssr94215 10 77202177 to 77202187 10 + TSS region transcription start site region 94215
Tssr94216 10 77202197 to 77202213 16 + TSS region transcription start site region 94216
D10Jhu60 10 77204849 to 77205123 274 DNA segment DNA segment, Chr 10, Johns Hopkins University 60
Gm35837 10 77206387 to 77243041 36654 + lncRNA gene predicted gene, 35837
Gm40704 10 77211020 to 77211935 915 + lncRNA gene predicted gene, 40704
Tssr98232 10 77211125 to 77211169 44 - TSS region transcription start site region 98232
Tssr3259 10 77215664 to 77215665 1 + TSS region transcription start site region 3259
D10Jhu59 10 77216484 to 77216911 427 DNA segment DNA segment, Chr 10, Johns Hopkins University 59
Tssr94217 10 77225709 to 77225717 8 + TSS region transcription start site region 94217
Tssr94218 10 77225719 to 77225729 10 + TSS region transcription start site region 94218
Tssr94219 10 77225922 to 77225971 49 + TSS region transcription start site region 94219
Gm40703 10 77250856 to 77252089 1233 - lncRNA gene predicted gene, 40703
Gm10941 10 77257776 to 77259223 1447 - bidirectional promoter lncRNA gene predicted gene 10941
Cpgi1755 10 77258724 to 77259949 1225 CpG island CpG island 1755
Pofut2 10 77259218 to 77269575 10357 + protein coding gene protein O-fucosyltransferase 2
Tssr94220 10 77259280 to 77259348 68 + TSS region transcription start site region 94220
Tssr94221 10 77259354 to 77259364 10 + TSS region transcription start site region 94221