Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:76082445-76393255

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc5a4b 10 76058618 to 76111018 52400 - protein coding gene solute carrier family 5 (neutral amino acid transporters, system A), member 4b
Tssr98164 10 76097568 to 76097571 3 - TSS region transcription start site region 98164
Tssr98165 10 76110956 to 76110962 6 - TSS region transcription start site region 98165
D10Jhu66 10 76118504 to 76118790 286 DNA segment DNA segment, Chr 10, Johns Hopkins University 66
Gm19217 10 76133434 to 76137291 3857 + pseudogene predicted gene, 19217
Slc5a4a 10 76147451 to 76189265 41814 + protein coding gene solute carrier family 5, member 4a
Tssr94167 10 76147503 to 76147515 12 + TSS region transcription start site region 94167
D10Mit174 10 76155848 to 76155993 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 174
Gm2628 10 76198194 to 76198981 787 - pseudogene predicted gene 2628
Cpgi1741 10 76203664 to 76203966 302 CpG island CpG island 1741
Prmt2 10 76207226 to 76237865 30639 - protein coding gene protein arginine N-methyltransferase 2
Del(10Prmt2-Cstb)4Yah 10 76207226 to 78427622 2220396 complex/cluster/region deletion, Chr10, Yann Herault 4
Del(10Prmt2-Pdxk)4Yey 10 76207226 to 78464948 2257722 chromosomal deletion deletion, Chr 10, Y Eugene Yu 4
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 complex/cluster/region deletion, Chr10, Yann Herault 1
Dp(10Prmt2-Pdxk)2Yey 10 76207226 to 78464948 2257722 chromosomal duplication duplication, Chr 10, Y Eugene Yu 2
Mir678 10 76207326 to 76207409 83 - miRNA gene microRNA 678
Cpgi1742 10 76237445 to 76238255 810 CpG island CpG island 1742
Tssr98166 10 76237789 to 76237796 7 - TSS region transcription start site region 98166
Tssr98167 10 76237822 to 76237867 45 - TSS region transcription start site region 98167
Tssr3252 10 76253817 to 76253822 5 + TSS region transcription start site region 3252
Tssr94168 10 76253848 to 76253866 18 + TSS region transcription start site region 94168
S100b 10 76253853 to 76261159 7306 + protein coding gene S100 protein, beta polypeptide, neural
Tssr94169 10 76253899 to 76253915 16 + TSS region transcription start site region 94169
Dip2a 10 76263049 to 76345291 82242 - protein coding gene disco interacting protein 2 homolog A
Tssr94170 10 76293148 to 76293163 15 + TSS region transcription start site region 94170
Gm16240 10 76293165 to 76294860 1695 + antisense lncRNA gene predicted gene 16240
Cpgi1743 10 76344482 to 76345701 1219 CpG island CpG island 1743
Tssr98168 10 76345254 to 76345371 117 - TSS region transcription start site region 98168
Gm40699 10 76345381 to 76347257 1876 + lncRNA gene predicted gene, 40699
Tssr94171 10 76345442 to 76345457 15 + TSS region transcription start site region 94171
Pcnt 10 76351263 to 76442786 91523 - protein coding gene pericentrin (kendrin)
Cpgi1744 10 76354821 to 76355083 262 CpG island CpG island 1744
Tssr98169 10 76388715 to 76388718 3 - TSS region transcription start site region 98169
Tssr94172 10 76388837 to 76388847 10 + TSS region transcription start site region 94172
Tssr98170 10 76388878 to 76388906 28 - TSS region transcription start site region 98170
1700094J05Rik 10 76389015 to 76401507 12492 + antisense lncRNA gene RIKEN cDNA 1700094J05 gene