Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:75913617-76245502

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smarcb1 10 75896769 to 75921614 24845 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Tssr98148 10 75920202 to 75920206 4 - TSS region transcription start site region 98148
Cpgi1735 10 75920874 to 75922123 1249 CpG island CpG island 1735
Tssr98149 10 75921404 to 75921415 11 - TSS region transcription start site region 98149
Tssr98150 10 75921418 to 75921440 22 - TSS region transcription start site region 98150
Tssr98151 10 75921546 to 75921553 7 - TSS region transcription start site region 98151
Tssr98152 10 75921562 to 75921625 63 - TSS region transcription start site region 98152
Mmp11 10 75923221 to 75932502 9281 - protein coding gene matrix metallopeptidase 11
Cpgi1736 10 75932093 to 75932877 784 CpG island CpG island 1736
Tssr98153 10 75932468 to 75932484 16 - TSS region transcription start site region 98153
Chchd10 10 75933130 to 75937747 4617 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 10
Tssr94147 10 75933319 to 75933353 34 + TSS region transcription start site region 94147
Tssr94148 10 75933356 to 75933377 21 + TSS region transcription start site region 94148
Cpgi1737 10 75935647 to 75936440 793 CpG island CpG island 1737
Tssr94149 10 75935856 to 75935872 16 + TSS region transcription start site region 94149
Tssr94150 10 75935878 to 75935908 30 + TSS region transcription start site region 94150
Tssr94151 10 75936226 to 75936259 33 + TSS region transcription start site region 94151
Tssr94152 10 75936274 to 75936292 18 + TSS region transcription start site region 94152
Tssr94153 10 75936305 to 75936322 17 + TSS region transcription start site region 94153
Tssr94154 10 75936324 to 75936333 9 + TSS region transcription start site region 94154
Tssr94155 10 75936404 to 75936417 13 + TSS region transcription start site region 94155
Tssr94156 10 75937162 to 75937174 12 + TSS region transcription start site region 94156
Tssr94157 10 75937176 to 75937195 19 + TSS region transcription start site region 94157
Tssr94158 10 75937297 to 75937333 36 + TSS region transcription start site region 94158
Gm867 10 75937723 to 75940672 2949 - protein coding gene predicted gene 867
Tssr98154 10 75938388 to 75938393 5 - TSS region transcription start site region 98154
Tssr98155 10 75939964 to 75940002 38 - TSS region transcription start site region 98155
Tssr98156 10 75940004 to 75940023 19 - TSS region transcription start site region 98156
Tssr98157 10 75940040 to 75940047 7 - TSS region transcription start site region 98157
Tssr98158 10 75940566 to 75940578 12 - TSS region transcription start site region 98158
Tssr98159 10 75940603 to 75940623 20 - TSS region transcription start site region 98159
Tssr98160 10 75940633 to 75940683 50 - TSS region transcription start site region 98160
Tssr94159 10 75943020 to 75943028 8 + TSS region transcription start site region 94159
Tssr94160 10 75943046 to 75943063 17 + TSS region transcription start site region 94160
Gm16221 10 75945295 to 75945687 392 - pseudogene predicted gene 16221
Tssr94161 10 75948292 to 75948333 41 + TSS region transcription start site region 94161
Vpreb3 10 75948312 to 75949648 1336 + protein coding gene pre-B lymphocyte gene 3
Tssr94162 10 75948335 to 75948353 18 + TSS region transcription start site region 94162
Cpgi1738 10 75950581 to 75951329 748 CpG island CpG island 1738
Gm40698 10 75953850 to 75954285 435 - lncRNA gene predicted gene, 40698
Cpgi1739 10 75954394 to 75954741 347 CpG island CpG island 1739
Gm5134 10 75954514 to 76009591 55077 + protein coding gene predicted gene 5134
Tssr94163 10 75954521 to 75954548 27 + TSS region transcription start site region 94163
Gm16219 10 75969898 to 75970171 273 + pseudogene predicted gene 16219
Gm16220 10 75992691 to 75993992 1301 - antisense lncRNA gene predicted gene 16220
Tssr94164 10 75993798 to 75993817 19 + TSS region transcription start site region 94164
Tssr98161 10 75994036 to 75994065 29 - TSS region transcription start site region 98161
Mir6409 10 76008926 to 76009017 91 + miRNA gene microRNA 6409
Tssr98162 10 76027025 to 76027030 5 - TSS region transcription start site region 98162
Tssr98163 10 76028064 to 76028091 27 - TSS region transcription start site region 98163
Cpgi1740 10 76032383 to 76033058 675 CpG island CpG island 1740
Zfp280b 10 76032401 to 76042970 10569 + protein coding gene zinc finger protein 280B
Tssr94165 10 76032598 to 76032660 62 + TSS region transcription start site region 94165
Tssr94166 10 76032665 to 76032699 34 + TSS region transcription start site region 94166
Slc5a4b 10 76058618 to 76111018 52400 - protein coding gene solute carrier family 5 (neutral amino acid transporters, system A), member 4b
Gm16222 10 76078617 to 76080502 1885 + antisense lncRNA gene predicted gene 16222
Tssr98164 10 76097568 to 76097571 3 - TSS region transcription start site region 98164
Tssr98165 10 76110956 to 76110962 6 - TSS region transcription start site region 98165
D10Jhu66 10 76118504 to 76118790 286 DNA segment DNA segment, Chr 10, Johns Hopkins University 66
Gm19217 10 76133434 to 76137291 3857 + pseudogene predicted gene, 19217
Slc5a4a 10 76147451 to 76189265 41814 + protein coding gene solute carrier family 5, member 4a
Tssr94167 10 76147503 to 76147515 12 + TSS region transcription start site region 94167
D10Mit174 10 76155848 to 76155993 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 174
Gm2628 10 76198194 to 76198981 787 - pseudogene predicted gene 2628
Cpgi1741 10 76203664 to 76203966 302 CpG island CpG island 1741
Del(10Prmt2-Pdxk)4Yey 10 76207226 to 78464948 2257722 chromosomal deletion deletion, Chr 10, Y Eugene Yu 4
Del(10Prmt2-Cstb)4Yah 10 76207226 to 78427622 2220396 complex/cluster/region deletion, Chr10, Yann Herault 4
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 complex/cluster/region deletion, Chr10, Yann Herault 1
Prmt2 10 76207226 to 76237865 30639 - protein coding gene protein arginine N-methyltransferase 2
Dp(10Prmt2-Pdxk)2Yey 10 76207226 to 78464948 2257722 chromosomal duplication duplication, Chr 10, Y Eugene Yu 2
Mir678 10 76207326 to 76207409 83 - miRNA gene microRNA 678
Cpgi1742 10 76237445 to 76238255 810 CpG island CpG island 1742
Tssr98166 10 76237789 to 76237796 7 - TSS region transcription start site region 98166
Tssr98167 10 76237822 to 76237867 45 - TSS region transcription start site region 98167