Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:75897451-76439265

Filter by:
99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smarcb1 10 75896769 to 75921614 24845 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Tssr98146 10 75904451 to 75904456 5 - TSS region transcription start site region 98146
D10Jhu68 10 75909485 to 75909691 206 DNA segment DNA segment, Chr 10, Johns Hopkins University 68
Tssr98147 10 75909929 to 75909934 5 - TSS region transcription start site region 98147
Tssr98148 10 75920202 to 75920206 4 - TSS region transcription start site region 98148
Cpgi1735 10 75920874 to 75922123 1249 CpG island CpG island 1735
Tssr98149 10 75921404 to 75921415 11 - TSS region transcription start site region 98149
Tssr98150 10 75921418 to 75921440 22 - TSS region transcription start site region 98150
Tssr98151 10 75921546 to 75921553 7 - TSS region transcription start site region 98151
Tssr98152 10 75921562 to 75921625 63 - TSS region transcription start site region 98152
Mmp11 10 75923221 to 75932502 9281 - protein coding gene matrix metallopeptidase 11
Cpgi1736 10 75932093 to 75932877 784 CpG island CpG island 1736
Tssr98153 10 75932468 to 75932484 16 - TSS region transcription start site region 98153
Chchd10 10 75933130 to 75937747 4617 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 10
Tssr94147 10 75933319 to 75933353 34 + TSS region transcription start site region 94147
Tssr94148 10 75933356 to 75933377 21 + TSS region transcription start site region 94148
Cpgi1737 10 75935647 to 75936440 793 CpG island CpG island 1737
Tssr94149 10 75935856 to 75935872 16 + TSS region transcription start site region 94149
Tssr94150 10 75935878 to 75935908 30 + TSS region transcription start site region 94150
Tssr94151 10 75936226 to 75936259 33 + TSS region transcription start site region 94151
Tssr94152 10 75936274 to 75936292 18 + TSS region transcription start site region 94152
Tssr94153 10 75936305 to 75936322 17 + TSS region transcription start site region 94153
Tssr94154 10 75936324 to 75936333 9 + TSS region transcription start site region 94154
Tssr94155 10 75936404 to 75936417 13 + TSS region transcription start site region 94155
Tssr94156 10 75937162 to 75937174 12 + TSS region transcription start site region 94156
Tssr94157 10 75937176 to 75937195 19 + TSS region transcription start site region 94157
Tssr94158 10 75937297 to 75937333 36 + TSS region transcription start site region 94158
Gm867 10 75937723 to 75940672 2949 - protein coding gene predicted gene 867
Tssr98154 10 75938388 to 75938393 5 - TSS region transcription start site region 98154
Tssr98155 10 75939964 to 75940002 38 - TSS region transcription start site region 98155
Tssr98156 10 75940004 to 75940023 19 - TSS region transcription start site region 98156
Tssr98157 10 75940040 to 75940047 7 - TSS region transcription start site region 98157
Tssr98158 10 75940566 to 75940578 12 - TSS region transcription start site region 98158
Tssr98159 10 75940603 to 75940623 20 - TSS region transcription start site region 98159
Tssr98160 10 75940633 to 75940683 50 - TSS region transcription start site region 98160
Tssr94159 10 75943020 to 75943028 8 + TSS region transcription start site region 94159
Tssr94160 10 75943046 to 75943063 17 + TSS region transcription start site region 94160
Gm16221 10 75945295 to 75945687 392 - pseudogene predicted gene 16221
Tssr94161 10 75948292 to 75948333 41 + TSS region transcription start site region 94161
Vpreb3 10 75948312 to 75949648 1336 + protein coding gene pre-B lymphocyte gene 3
Tssr94162 10 75948335 to 75948353 18 + TSS region transcription start site region 94162
Cpgi1738 10 75950581 to 75951329 748 CpG island CpG island 1738
Gm40698 10 75953850 to 75954285 435 - lncRNA gene predicted gene, 40698
Cpgi1739 10 75954394 to 75954741 347 CpG island CpG island 1739
Gm5134 10 75954514 to 76009591 55077 + protein coding gene predicted gene 5134
Tssr94163 10 75954521 to 75954548 27 + TSS region transcription start site region 94163
Gm16219 10 75969898 to 75970171 273 + pseudogene predicted gene 16219
Gm16220 10 75992691 to 75993992 1301 - antisense lncRNA gene predicted gene 16220
Tssr94164 10 75993798 to 75993817 19 + TSS region transcription start site region 94164
Tssr98161 10 75994036 to 75994065 29 - TSS region transcription start site region 98161
Mir6409 10 76008926 to 76009017 91 + miRNA gene microRNA 6409
Tssr98162 10 76027025 to 76027030 5 - TSS region transcription start site region 98162
Tssr98163 10 76028064 to 76028091 27 - TSS region transcription start site region 98163
Cpgi1740 10 76032383 to 76033058 675 CpG island CpG island 1740
Zfp280b 10 76032401 to 76042970 10569 + protein coding gene zinc finger protein 280B
Tssr94165 10 76032598 to 76032660 62 + TSS region transcription start site region 94165
Tssr94166 10 76032665 to 76032699 34 + TSS region transcription start site region 94166
Slc5a4b 10 76058618 to 76111018 52400 - protein coding gene solute carrier family 5 (neutral amino acid transporters, system A), member 4b
Gm16222 10 76078617 to 76080502 1885 + antisense lncRNA gene predicted gene 16222
Tssr98164 10 76097568 to 76097571 3 - TSS region transcription start site region 98164
Tssr98165 10 76110956 to 76110962 6 - TSS region transcription start site region 98165
D10Jhu66 10 76118504 to 76118790 286 DNA segment DNA segment, Chr 10, Johns Hopkins University 66
Gm19217 10 76133434 to 76137291 3857 + pseudogene predicted gene, 19217
Slc5a4a 10 76147451 to 76189265 41814 + protein coding gene solute carrier family 5, member 4a
Tssr94167 10 76147503 to 76147515 12 + TSS region transcription start site region 94167
D10Mit174 10 76155848 to 76155993 145 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 174
Gm2628 10 76198194 to 76198981 787 - pseudogene predicted gene 2628
Cpgi1741 10 76203664 to 76203966 302 CpG island CpG island 1741
Del(10Prmt2-Col6a1)1Yah 10 76207226 to 76726044 518818 complex/cluster/region deletion, Chr10, Yann Herault 1
Del(10Prmt2-Cstb)4Yah 10 76207226 to 78427622 2220396 complex/cluster/region deletion, Chr10, Yann Herault 4
Del(10Prmt2-Pdxk)4Yey 10 76207226 to 78464948 2257722 chromosomal deletion deletion, Chr 10, Y Eugene Yu 4
Prmt2 10 76207226 to 76237865 30639 - protein coding gene protein arginine N-methyltransferase 2
Dp(10Prmt2-Pdxk)2Yey 10 76207226 to 78464948 2257722 chromosomal duplication duplication, Chr 10, Y Eugene Yu 2
Mir678 10 76207326 to 76207409 83 - miRNA gene microRNA 678
Cpgi1742 10 76237445 to 76238255 810 CpG island CpG island 1742
Tssr98166 10 76237789 to 76237796 7 - TSS region transcription start site region 98166
Tssr98167 10 76237822 to 76237867 45 - TSS region transcription start site region 98167
Tssr3252 10 76253817 to 76253822 5 + TSS region transcription start site region 3252
Tssr94168 10 76253848 to 76253866 18 + TSS region transcription start site region 94168
S100b 10 76253853 to 76261159 7306 + protein coding gene S100 protein, beta polypeptide, neural
Tssr94169 10 76253899 to 76253915 16 + TSS region transcription start site region 94169
Dip2a 10 76263049 to 76345291 82242 - protein coding gene disco interacting protein 2 homolog A
Tssr94170 10 76293148 to 76293163 15 + TSS region transcription start site region 94170
Gm16240 10 76293165 to 76294860 1695 + antisense lncRNA gene predicted gene 16240
Cpgi1743 10 76344482 to 76345701 1219 CpG island CpG island 1743
Tssr98168 10 76345254 to 76345371 117 - TSS region transcription start site region 98168
Gm40699 10 76345381 to 76347257 1876 + lncRNA gene predicted gene, 40699
Tssr94171 10 76345442 to 76345457 15 + TSS region transcription start site region 94171
Pcnt 10 76351263 to 76442786 91523 - protein coding gene pericentrin (kendrin)
Cpgi1744 10 76354821 to 76355083 262 CpG island CpG island 1744
Tssr98169 10 76388715 to 76388718 3 - TSS region transcription start site region 98169
Tssr94172 10 76388837 to 76388847 10 + TSS region transcription start site region 94172
Tssr98170 10 76388878 to 76388906 28 - TSS region transcription start site region 98170
1700094J05Rik 10 76389015 to 76401507 12492 + antisense lncRNA gene RIKEN cDNA 1700094J05 gene
D10Jhu19 10 76400690 to 76400905 215 DNA segment DNA segment, Chr 10, Johns Hopkins University 19
D10Jhu63 10 76415389 to 76415769 380 DNA segment DNA segment, Chr 10, Johns Hopkins University 63
Tssr98171 10 76416781 to 76416804 23 - TSS region transcription start site region 98171
Tssr98172 10 76416860 to 76416876 16 - TSS region transcription start site region 98172
Tssr98173 10 76425451 to 76425454 3 - TSS region transcription start site region 98173