Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:75837468-76027484

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1732 10 75837130 to 75837651 521 CpG island CpG island 1732
Tssr94139 10 75837467 to 75837476 9 + TSS region transcription start site region 94139
Tssr94140 10 75837513 to 75837530 17 + TSS region transcription start site region 94140
Tssr94141 10 75837534 to 75837553 19 + TSS region transcription start site region 94141
Tssr94142 10 75841962 to 75841965 3 + TSS region transcription start site region 94142
Tssr94143 10 75842538 to 75842542 4 + TSS region transcription start site region 94143
Tssr3251 10 75853248 to 75853252 4 + TSS region transcription start site region 3251
Tssr94144 10 75853600 to 75853603 3 + TSS region transcription start site region 94144
Mif 10 75859353 to 75860240 887 - protein coding gene macrophage migration inhibitory factor (glycosylation-inhibiting factor)
Cpgi1733 10 75859532 to 75860471 939 CpG island CpG island 1733
Tssr98140 10 75859965 to 75860039 74 - TSS region transcription start site region 98140
Tssr98141 10 75860214 to 75860221 7 - TSS region transcription start site region 98141
Tssr98142 10 75860254 to 75860289 35 - TSS region transcription start site region 98142
Tssr98143 10 75860299 to 75860310 11 - TSS region transcription start site region 98143
Gm40697 10 75860404 to 75861698 1294 + lncRNA gene predicted gene, 40697
Gm47744 10 75875431 to 75875804 373 + pseudogene predicted gene, 47744
Tssr98144 10 75893002 to 75893009 7 - TSS region transcription start site region 98144
Tssr98145 10 75893061 to 75893082 21 - TSS region transcription start site region 98145
Cpgi1734 10 75893067 to 75894077 1010 CpG island CpG island 1734
Tssr94145 10 75893403 to 75893429 26 + TSS region transcription start site region 94145
Derl3 10 75893413 to 75895941 2528 + protein coding gene Der1-like domain family, member 3
Tssr94146 10 75893443 to 75893452 9 + TSS region transcription start site region 94146
Smarcb1 10 75896769 to 75921614 24845 - protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Tssr98146 10 75904451 to 75904456 5 - TSS region transcription start site region 98146
D10Jhu68 10 75909485 to 75909691 206 DNA segment DNA segment, Chr 10, Johns Hopkins University 68
Tssr98147 10 75909929 to 75909934 5 - TSS region transcription start site region 98147
Tssr98148 10 75920202 to 75920206 4 - TSS region transcription start site region 98148
Cpgi1735 10 75920874 to 75922123 1249 CpG island CpG island 1735
Tssr98149 10 75921404 to 75921415 11 - TSS region transcription start site region 98149
Tssr98150 10 75921418 to 75921440 22 - TSS region transcription start site region 98150
Tssr98151 10 75921546 to 75921553 7 - TSS region transcription start site region 98151
Tssr98152 10 75921562 to 75921625 63 - TSS region transcription start site region 98152
Mmp11 10 75923221 to 75932502 9281 - protein coding gene matrix metallopeptidase 11
Cpgi1736 10 75932093 to 75932877 784 CpG island CpG island 1736
Tssr98153 10 75932468 to 75932484 16 - TSS region transcription start site region 98153
Chchd10 10 75933130 to 75937747 4617 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 10
Tssr94147 10 75933319 to 75933353 34 + TSS region transcription start site region 94147
Tssr94148 10 75933356 to 75933377 21 + TSS region transcription start site region 94148
Cpgi1737 10 75935647 to 75936440 793 CpG island CpG island 1737
Tssr94149 10 75935856 to 75935872 16 + TSS region transcription start site region 94149
Tssr94150 10 75935878 to 75935908 30 + TSS region transcription start site region 94150
Tssr94151 10 75936226 to 75936259 33 + TSS region transcription start site region 94151
Tssr94152 10 75936274 to 75936292 18 + TSS region transcription start site region 94152
Tssr94153 10 75936305 to 75936322 17 + TSS region transcription start site region 94153
Tssr94154 10 75936324 to 75936333 9 + TSS region transcription start site region 94154
Tssr94155 10 75936404 to 75936417 13 + TSS region transcription start site region 94155
Tssr94156 10 75937162 to 75937174 12 + TSS region transcription start site region 94156
Tssr94157 10 75937176 to 75937195 19 + TSS region transcription start site region 94157
Tssr94158 10 75937297 to 75937333 36 + TSS region transcription start site region 94158
Gm867 10 75937723 to 75940672 2949 - protein coding gene predicted gene 867
Tssr98154 10 75938388 to 75938393 5 - TSS region transcription start site region 98154
Tssr98155 10 75939964 to 75940002 38 - TSS region transcription start site region 98155
Tssr98156 10 75940004 to 75940023 19 - TSS region transcription start site region 98156
Tssr98157 10 75940040 to 75940047 7 - TSS region transcription start site region 98157
Tssr98158 10 75940566 to 75940578 12 - TSS region transcription start site region 98158
Tssr98159 10 75940603 to 75940623 20 - TSS region transcription start site region 98159
Tssr98160 10 75940633 to 75940683 50 - TSS region transcription start site region 98160
Tssr94159 10 75943020 to 75943028 8 + TSS region transcription start site region 94159
Tssr94160 10 75943046 to 75943063 17 + TSS region transcription start site region 94160
Gm16221 10 75945295 to 75945687 392 - pseudogene predicted gene 16221
Tssr94161 10 75948292 to 75948333 41 + TSS region transcription start site region 94161
Vpreb3 10 75948312 to 75949648 1336 + protein coding gene pre-B lymphocyte gene 3
Tssr94162 10 75948335 to 75948353 18 + TSS region transcription start site region 94162
Cpgi1738 10 75950581 to 75951329 748 CpG island CpG island 1738
Gm40698 10 75953850 to 75954285 435 - lncRNA gene predicted gene, 40698
Cpgi1739 10 75954394 to 75954741 347 CpG island CpG island 1739
Gm5134 10 75954514 to 76009591 55077 + protein coding gene predicted gene 5134
Tssr94163 10 75954521 to 75954548 27 + TSS region transcription start site region 94163
Gm16219 10 75969898 to 75970171 273 + pseudogene predicted gene 16219
Gm16220 10 75992691 to 75993992 1301 - antisense lncRNA gene predicted gene 16220
Tssr94164 10 75993798 to 75993817 19 + TSS region transcription start site region 94164
Tssr98161 10 75994036 to 75994065 29 - TSS region transcription start site region 98161
Mir6409 10 76008926 to 76009017 91 + miRNA gene microRNA 6409
Tssr98162 10 76027025 to 76027030 5 - TSS region transcription start site region 98162