Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:75521135-75841262

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snrpd3 10 75518042 to 75535440 17398 + protein coding gene small nuclear ribonucleoprotein D3
Gm35061 10 75526285 to 75526942 657 - pseudogene predicted gene, 35061
D10Mit287a 10 75528061 to 75528159 98 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 287a
D10Mit287b 10 75528061 to 75528207 146 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 287b
Tssr94110 10 75532008 to 75532026 18 + TSS region transcription start site region 94110
Lrrc75b 10 75550123 to 75560330 10207 - protein coding gene leucine rich repeat containing 75B
Cpgi1724 10 75559299 to 75560755 1456 CpG island CpG island 1724
Tssr98113 10 75560081 to 75560099 18 - TSS region transcription start site region 98113
Tssr98114 10 75560108 to 75560124 16 - TSS region transcription start site region 98114
Tssr94111 10 75561269 to 75561279 10 + TSS region transcription start site region 94111
D10Jhu72 10 75562822 to 75563049 227 DNA segment DNA segment, Chr 10, Johns Hopkins University 72
Tssr94112 10 75564086 to 75564165 79 + TSS region transcription start site region 94112
Ggt1 10 75564114 to 75586192 22078 + protein coding gene gamma-glutamyltransferase 1
Tssr94113 10 75564168 to 75564179 11 + TSS region transcription start site region 94113
Tssr94114 10 75564181 to 75564197 16 + TSS region transcription start site region 94114
Tssr94115 10 75564198 to 75564217 19 + TSS region transcription start site region 94115
Tssr94116 10 75564584 to 75564601 17 + TSS region transcription start site region 94116
Tssr94117 10 75566172 to 75566187 15 + TSS region transcription start site region 94117
Tssr94118 10 75566219 to 75566241 22 + TSS region transcription start site region 94118
Tssr94119 10 75566257 to 75566302 45 + TSS region transcription start site region 94119
Tssr94120 10 75568630 to 75568639 9 + TSS region transcription start site region 94120
Tssr94121 10 75568641 to 75568645 4 + TSS region transcription start site region 94121
Tssr94122 10 75568648 to 75568673 25 + TSS region transcription start site region 94122
Tssr94123 10 75571503 to 75571512 9 + TSS region transcription start site region 94123
Tssr94124 10 75571522 to 75571532 10 + TSS region transcription start site region 94124
Tssr94125 10 75571542 to 75571551 9 + TSS region transcription start site region 94125
Tssr94126 10 75571553 to 75571586 33 + TSS region transcription start site region 94126
Tssr94127 10 75573450 to 75573464 14 + TSS region transcription start site region 94127
Tssr94128 10 75573492 to 75573501 9 + TSS region transcription start site region 94128
Tssr94129 10 75573509 to 75573528 19 + TSS region transcription start site region 94129
Tssr94130 10 75574200 to 75574225 25 + TSS region transcription start site region 94130
Ggt5 10 75589324 to 75616968 27644 + protein coding gene gamma-glutamyltransferase 5
Tssr94131 10 75589338 to 75589343 5 + TSS region transcription start site region 94131
Tssr94132 10 75589352 to 75589355 3 + TSS region transcription start site region 94132
Tssr94133 10 75589363 to 75589390 27 + TSS region transcription start site region 94133
Tssr94134 10 75589423 to 75589437 14 + TSS region transcription start site region 94134
Tssr94135 10 75589461 to 75589483 22 + TSS region transcription start site region 94135
Cpgi1725 10 75589656 to 75590042 386 CpG island CpG island 1725
Gm9985 10 75590142 to 75590653 511 - pseudogene predicted gene 9985
Cpgi1726 10 75603815 to 75603997 182 CpG island CpG island 1726
Gm26402 10 75613157 to 75613269 112 - snRNA gene predicted gene, 26402
Gm19688 10 75619080 to 75619503 423 - pseudogene predicted gene, 19688
Gm40695 10 75632351 to 75636405 4054 - lncRNA gene predicted gene, 40695
D10Jhu71e 10 75635968 to 75636200 232 DNA segment DNA segment, Chr 10, Johns Hopkins University 71 expressed
Susd2 10 75636706 to 75644008 7302 - protein coding gene sushi domain containing 2
Tssr98115 10 75643971 to 75643986 15 - TSS region transcription start site region 98115
Tssr3249 10 75643994 to 75643995 1 - TSS region transcription start site region 3249
Cabin1 10 75646112 to 75764341 118229 - protein coding gene calcineurin binding protein 1
Cpgi1727 10 75667070 to 75668335 1265 CpG island CpG island 1727
Tssr98116 10 75667579 to 75667616 37 - TSS region transcription start site region 98116
Tssr98117 10 75668032 to 75668046 14 - TSS region transcription start site region 98117
Tssr98118 10 75668049 to 75668101 52 - TSS region transcription start site region 98118
Bsc1 10 75681135 to 75681262 127 QTL brain size control 1
D10Mit186 10 75681135 to 75681262 127 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 186
Gm40696 10 75695055 to 75709263 14208 + lncRNA gene predicted gene, 40696
D10Jhu70 10 75743211 to 75743506 295 DNA segment DNA segment, Chr 10, Johns Hopkins University 70
Cpgi1728 10 75763796 to 75764717 921 CpG island CpG island 1728
Tssr98119 10 75764182 to 75764238 56 - TSS region transcription start site region 98119
Tssr98120 10 75764265 to 75764359 94 - TSS region transcription start site region 98120
Tssr94136 10 75764443 to 75764477 34 + TSS region transcription start site region 94136
Gm19326 10 75767161 to 75767486 325 + pseudogene predicted gene, 19326
Ddt 10 75771233 to 75773374 2141 - protein coding gene D-dopachrome tautomerase
Gm20441 10 75771451 to 75780954 9503 - protein coding gene predicted gene 20441
Cpgi1729 10 75772706 to 75773379 673 CpG island CpG island 1729
Tssr98121 10 75773350 to 75773434 84 - TSS region transcription start site region 98121
Gstt3 10 75774122 to 75781414 7292 - protein coding gene glutathione S-transferase, theta 3
D10Jhu69 10 75779313 to 75779466 153 DNA segment DNA segment, Chr 10, Johns Hopkins University 69
D10Mit158 10 75780308 to 75780408 100 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 158
Cpgi1730 10 75780796 to 75781238 442 CpG island CpG island 1730
Tssr98122 10 75781036 to 75781110 74 - TSS region transcription start site region 98122
Tssr98123 10 75781392 to 75781410 18 - TSS region transcription start site region 98123
Tssr98124 10 75781411 to 75781434 23 - TSS region transcription start site region 98124
Gstt1 10 75783813 to 75798584 14771 - protein coding gene glutathione S-transferase, theta 1
Tssr98125 10 75789930 to 75789957 27 - TSS region transcription start site region 98125
Tssr98126 10 75797528 to 75797536 8 - TSS region transcription start site region 98126
Tssr98127 10 75797728 to 75797757 29 - TSS region transcription start site region 98127
Tssr98128 10 75797760 to 75797776 16 - TSS region transcription start site region 98128
Tssr98129 10 75798517 to 75798553 36 - TSS region transcription start site region 98129
Tssr98130 10 75798576 to 75798587 11 - TSS region transcription start site region 98130
D10Mit241 10 75813788 to 75813929 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 241
Gstt4 10 75814943 to 75822543 7600 - protein coding gene glutathione S-transferase, theta 4
Tssr98131 10 75822489 to 75822511 22 - TSS region transcription start site region 98131
Tssr3250 10 75822514 to 75822515 1 - TSS region transcription start site region 3250
Tssr98132 10 75822521 to 75822548 27 - TSS region transcription start site region 98132
Gstt2 10 75831842 to 75837419 5577 - protein coding gene glutathione S-transferase, theta 2
Cpgi1731 10 75834133 to 75834683 550 CpG island CpG island 1731
Tssr98133 10 75834402 to 75834432 30 - TSS region transcription start site region 98133
Tssr98134 10 75834435 to 75834494 59 - TSS region transcription start site region 98134
Tssr94137 10 75835051 to 75835054 3 + TSS region transcription start site region 94137
Tssr98135 10 75835358 to 75835373 15 - TSS region transcription start site region 98135
Tssr98136 10 75835541 to 75835597 56 - TSS region transcription start site region 98136
Tssr94138 10 75835971 to 75835980 9 + TSS region transcription start site region 94138
4933425E08Rik 10 75835975 to 75837423 1448 unclassified gene RIKEN cDNA 4933425E08 gene
Cpgi1732 10 75837130 to 75837651 521 CpG island CpG island 1732
Tssr98137 10 75837313 to 75837332 19 - TSS region transcription start site region 98137
Tssr98138 10 75837340 to 75837383 43 - TSS region transcription start site region 98138
Tssr98139 10 75837412 to 75837427 15 - TSS region transcription start site region 98139
Tssr94139 10 75837467 to 75837476 9 + TSS region transcription start site region 94139
Tssr94140 10 75837513 to 75837530 17 + TSS region transcription start site region 94140
Tssr94141 10 75837534 to 75837553 19 + TSS region transcription start site region 94141