Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:74547177-75436907

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94062 10 74547864 to 74547888 24 + TSS region transcription start site region 94062
Clfrhl1 10 74612426 to 74612426 0 QTL click-frequency hearing loss 1
Lfhl1 10 74612426 to 74612426 0 QTL low-frequency hearing loss 1
Mfhl1 10 74612426 to 74612426 0 QTL medium-frequency hearing loss 1
Cpgi1713 10 74645521 to 74646008 487 CpG island CpG island 1713
Gm7034 10 74820722 to 74821366 644 + pseudogene predicted gene 7034
Gm6419 10 74862988 to 74863416 428 - pseudogene predicted gene 6419
Tssr98094 10 74863509 to 74863513 4 - TSS region transcription start site region 98094
D10Mit64 10 74874441 to 74874606 165 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 64
Cpgi1714 10 74925382 to 74925857 475 CpG island CpG island 1714
Rsph14 10 74957477 to 75032586 75109 - protein coding gene radial spoke head homolog 14 (Chlamydomonas)
Cpgi1715 10 74966572 to 74968186 1614 CpG island CpG island 1715
Tssr94063 10 74967084 to 74967098 14 + TSS region transcription start site region 94063
Tssr94064 10 74967127 to 74967162 35 + TSS region transcription start site region 94064
Tssr94065 10 74967164 to 74967203 39 + TSS region transcription start site region 94065
Gnaz 10 74967177 to 75016907 49730 + protein coding gene guanine nucleotide binding protein, alpha z subunit
Tssr94066 10 74978632 to 74978635 3 + TSS region transcription start site region 94066
Tssr94067 10 75015308 to 75015332 24 + TSS region transcription start site region 94067
Tssr98095 10 75032538 to 75032588 50 - TSS region transcription start site region 98095
Gm40692 10 75034345 to 75035027 682 + lncRNA gene predicted gene, 40692
Cpgi1716 10 75036877 to 75037446 569 CpG island CpG island 1716
Rab36 10 75037058 to 75054748 17690 + protein coding gene RAB36, member RAS oncogene family
Tssr94068 10 75037077 to 75037100 23 + TSS region transcription start site region 94068
Tssr94069 10 75037244 to 75037288 44 + TSS region transcription start site region 94069
Tssr94070 10 75037291 to 75037332 41 + TSS region transcription start site region 94070
Tssr98096 10 75052983 to 75053006 23 - TSS region transcription start site region 98096
Tssr98097 10 75053011 to 75053022 11 - TSS region transcription start site region 98097
Cpgi1717 10 75060022 to 75062380 2358 CpG island CpG island 1717
Tssr94071 10 75060551 to 75060628 77 + TSS region transcription start site region 94071
Tssr94072 10 75060823 to 75060848 25 + TSS region transcription start site region 94072
Tssr94073 10 75060885 to 75060901 16 + TSS region transcription start site region 94073
Bcr 10 75060896 to 75184923 124027 + protein coding gene breakpoint cluster region
Tssr94074 10 75098454 to 75098455 1 + TSS region transcription start site region 94074
Tssr94075 10 75130567 to 75130631 64 + TSS region transcription start site region 94075
Tssr94076 10 75130981 to 75131001 20 + TSS region transcription start site region 94076
Tssr98098 10 75131684 to 75131705 21 - TSS region transcription start site region 98098
Tssr98099 10 75131727 to 75131752 25 - TSS region transcription start site region 98099
Tssr98100 10 75150097 to 75150103 6 - TSS region transcription start site region 98100
Tssr98101 10 75152862 to 75152868 6 - TSS region transcription start site region 98101
Tssr94077 10 75173790 to 75173798 8 + TSS region transcription start site region 94077
Tssr94078 10 75173844 to 75173852 8 + TSS region transcription start site region 94078
Tssr94079 10 75173966 to 75173980 14 + TSS region transcription start site region 94079
Tssr98102 10 75185174 to 75185184 10 - TSS region transcription start site region 98102
Tssr98103 10 75185187 to 75185203 16 - TSS region transcription start site region 98103
Tssr94080 10 75194724 to 75194737 13 + TSS region transcription start site region 94080
Cpgi1718 10 75211742 to 75212704 962 CpG island CpG island 1718
Specc1l 10 75212037 to 75312400 100363 + protein coding gene sperm antigen with calponin homology and coiled-coil domains 1-like
Tssr94081 10 75212047 to 75212058 11 + TSS region transcription start site region 94081
Tssr94082 10 75212065 to 75212150 85 + TSS region transcription start site region 94082
Tssr94083 10 75212158 to 75212187 29 + TSS region transcription start site region 94083
Tssr94084 10 75222125 to 75222158 33 + TSS region transcription start site region 94084
Tssr94085 10 75223534 to 75223569 35 + TSS region transcription start site region 94085
D10Mit116 10 75224520 to 75224666 146 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 116
Tssr94086 10 75241155 to 75241176 21 + TSS region transcription start site region 94086
D10Mit91 10 75250410 to 75250558 148 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 91
Tssr98104 10 75273202 to 75273211 9 - TSS region transcription start site region 98104
Tssr94087 10 75273350 to 75273370 20 + TSS region transcription start site region 94087
Tssr94088 10 75278310 to 75278315 5 + TSS region transcription start site region 94088
Gm46234 10 75282777 to 75283035 258 - pseudogene predicted gene, 46234
D10Mit225 10 75300146 to 75300266 120 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 225
Tssr98105 10 75301996 to 75302005 9 - TSS region transcription start site region 98105
Tssr98106 10 75303334 to 75303374 40 - TSS region transcription start site region 98106
Tssr94089 10 75303617 to 75303624 7 + TSS region transcription start site region 94089
Cpgi1719 10 75316665 to 75317937 1272 CpG island CpG island 1719
Tssr94090 10 75316725 to 75316736 11 + TSS region transcription start site region 94090
Tssr94091 10 75316871 to 75316882 11 + TSS region transcription start site region 94091
Adora2a 10 75316877 to 75334784 17907 + protein coding gene adenosine A2a receptor
Tssr94092 10 75316895 to 75316904 9 + TSS region transcription start site region 94092
Tssr94093 10 75316917 to 75316955 38 + TSS region transcription start site region 94093
Tssr94094 10 75316964 to 75316988 24 + TSS region transcription start site region 94094
Tssr94095 10 75317054 to 75317073 19 + TSS region transcription start site region 94095
Tssr94096 10 75317076 to 75317124 48 + TSS region transcription start site region 94096
Tssr98107 10 75317563 to 75317574 11 - TSS region transcription start site region 98107
Tssr94097 10 75324929 to 75324937 8 + TSS region transcription start site region 94097
Tssr94098 10 75324941 to 75324963 22 + TSS region transcription start site region 94098
Tssr94099 10 75324968 to 75324979 11 + TSS region transcription start site region 94099
Tssr94100 10 75324982 to 75324989 7 + TSS region transcription start site region 94100
Cpgi1720 10 75326119 to 75326318 199 CpG island CpG island 1720
Cpgi1721 10 75333312 to 75333685 373 CpG island CpG island 1721
Tssr3246 10 75351979 to 75351986 7 + TSS region transcription start site region 3246
Gm5779 10 75352055 to 75352961 906 + pseudogene predicted gene 5779
Gm40694 10 75400745 to 75402251 1506 + lncRNA gene predicted gene, 40694
Upb1 10 75406911 to 75441679 34768 + protein coding gene ureidopropionase, beta
Tssr3247 10 75406933 to 75406936 3 + TSS region transcription start site region 3247
Tssr94101 10 75406941 to 75406954 13 + TSS region transcription start site region 94101
Tssr94102 10 75406967 to 75406974 7 + TSS region transcription start site region 94102
Tssr94103 10 75407005 to 75407022 17 + TSS region transcription start site region 94103
Tssr94104 10 75410019 to 75410054 35 + TSS region transcription start site region 94104
Tssr94105 10 75430047 to 75430057 10 + TSS region transcription start site region 94105
Tssr98108 10 75434447 to 75434471 24 - TSS region transcription start site region 98108