Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:74534441-75214606

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94062 10 74547864 to 74547888 24 + TSS region transcription start site region 94062
Lfhl1 10 74612426 to 74612426 0 QTL low-frequency hearing loss 1
Clfrhl1 10 74612426 to 74612426 0 QTL click-frequency hearing loss 1
Mfhl1 10 74612426 to 74612426 0 QTL medium-frequency hearing loss 1
Cpgi1713 10 74645521 to 74646008 487 CpG island CpG island 1713
Gm7034 10 74820722 to 74821366 644 + pseudogene predicted gene 7034
Gm6419 10 74862988 to 74863416 428 - pseudogene predicted gene 6419
Tssr98094 10 74863509 to 74863513 4 - TSS region transcription start site region 98094
D10Mit64 10 74874441 to 74874606 165 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 64
Cpgi1714 10 74925382 to 74925857 475 CpG island CpG island 1714
Rsph14 10 74957477 to 75032586 75109 - protein coding gene radial spoke head homolog 14 (Chlamydomonas)
Cpgi1715 10 74966572 to 74968186 1614 CpG island CpG island 1715
Tssr94063 10 74967084 to 74967098 14 + TSS region transcription start site region 94063
Tssr94064 10 74967127 to 74967162 35 + TSS region transcription start site region 94064
Tssr94065 10 74967164 to 74967203 39 + TSS region transcription start site region 94065
Gnaz 10 74967177 to 75016907 49730 + protein coding gene guanine nucleotide binding protein, alpha z subunit
Tssr94066 10 74978632 to 74978635 3 + TSS region transcription start site region 94066
Tssr94067 10 75015308 to 75015332 24 + TSS region transcription start site region 94067
Tssr98095 10 75032538 to 75032588 50 - TSS region transcription start site region 98095
Gm40692 10 75034345 to 75035027 682 + lncRNA gene predicted gene, 40692
Cpgi1716 10 75036877 to 75037446 569 CpG island CpG island 1716
Rab36 10 75037058 to 75054748 17690 + protein coding gene RAB36, member RAS oncogene family
Tssr94068 10 75037077 to 75037100 23 + TSS region transcription start site region 94068
Tssr94069 10 75037244 to 75037288 44 + TSS region transcription start site region 94069
Tssr94070 10 75037291 to 75037332 41 + TSS region transcription start site region 94070
Tssr98096 10 75052983 to 75053006 23 - TSS region transcription start site region 98096
Tssr98097 10 75053011 to 75053022 11 - TSS region transcription start site region 98097
Cpgi1717 10 75060022 to 75062380 2358 CpG island CpG island 1717
Tssr94071 10 75060551 to 75060628 77 + TSS region transcription start site region 94071
Tssr94072 10 75060823 to 75060848 25 + TSS region transcription start site region 94072
Tssr94073 10 75060885 to 75060901 16 + TSS region transcription start site region 94073
Bcr 10 75060896 to 75184923 124027 + protein coding gene breakpoint cluster region
Tssr94074 10 75098454 to 75098455 1 + TSS region transcription start site region 94074
Tssr94075 10 75130567 to 75130631 64 + TSS region transcription start site region 94075
Tssr94076 10 75130981 to 75131001 20 + TSS region transcription start site region 94076
Tssr98098 10 75131684 to 75131705 21 - TSS region transcription start site region 98098
Tssr98099 10 75131727 to 75131752 25 - TSS region transcription start site region 98099
Tssr98100 10 75150097 to 75150103 6 - TSS region transcription start site region 98100
Tssr98101 10 75152862 to 75152868 6 - TSS region transcription start site region 98101
Tssr94077 10 75173790 to 75173798 8 + TSS region transcription start site region 94077
Tssr94078 10 75173844 to 75173852 8 + TSS region transcription start site region 94078
Tssr94079 10 75173966 to 75173980 14 + TSS region transcription start site region 94079
Tssr98102 10 75185174 to 75185184 10 - TSS region transcription start site region 98102
Tssr98103 10 75185187 to 75185203 16 - TSS region transcription start site region 98103
Tssr94080 10 75194724 to 75194737 13 + TSS region transcription start site region 94080
Cpgi1718 10 75211742 to 75212704 962 CpG island CpG island 1718
Specc1l 10 75212037 to 75312400 100363 + protein coding gene sperm antigen with calponin homology and coiled-coil domains 1-like
Tssr94081 10 75212047 to 75212058 11 + TSS region transcription start site region 94081
Tssr94082 10 75212065 to 75212150 85 + TSS region transcription start site region 94082
Tssr94083 10 75212158 to 75212187 29 + TSS region transcription start site region 94083