Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:72649342-75099737

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1711 10 72654649 to 72655196 547 CpG island CpG island 1711
Tssr98088 10 72654706 to 72654727 21 - TSS region transcription start site region 98088
Zwint 10 72654846 to 72674964 20118 + protein coding gene ZW10 interactor
Tssr94037 10 72654855 to 72654866 11 + TSS region transcription start site region 94037
Tssr94038 10 72654873 to 72654920 47 + TSS region transcription start site region 94038
Tssr94039 10 72657324 to 72657339 15 + TSS region transcription start site region 94039
2610034E01Rik 10 72657903 to 72661765 3862 unclassified gene RIKEN cDNA 2610034E01 gene
Tssr94040 10 72658121 to 72658126 5 + TSS region transcription start site region 94040
Tssr94041 10 72671353 to 72671369 16 + TSS region transcription start site region 94041
Tssr94042 10 72671374 to 72671387 13 + TSS region transcription start site region 94042
Tssr94043 10 72673977 to 72674015 38 + TSS region transcription start site region 94043
Tssr94044 10 72674221 to 72674355 134 + TSS region transcription start site region 94044
D10Mit259 10 72676559 to 72676670 111 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 259
Gm47094 10 72717931 to 72718490 559 + pseudogene predicted gene, 47094
Gm34776 10 72940238 to 72949792 9554 - lincRNA gene predicted gene, 34776
Tssr3245 10 72957947 to 72957949 2 + TSS region transcription start site region 3245
A330049N07Rik 10 72973303 to 73086705 113402 - lincRNA gene RIKEN cDNA A330049N07 gene
D10Mit200 10 73062893 to 73063002 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 200
Tssr98089 10 73086705 to 73086731 26 - TSS region transcription start site region 98089
Cpgi1712 10 73098861 to 73100376 1515 CpG island CpG island 1712
Tssr94045 10 73099154 to 73099177 23 + TSS region transcription start site region 94045
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94046 10 73171316 to 73171345 29 + TSS region transcription start site region 94046
Gm37438 10 73182926 to 73183318 392 - unclassified gene predicted gene, 37438
Gm15398 10 73201399 to 73327175 125776 - lincRNA gene predicted gene 15398
Tssr94047 10 73201525 to 73201527 2 + TSS region transcription start site region 94047
Gm5778 10 73201695 to 73202766 1071 + pseudogene predicted gene 5778
Tssr94048 10 73201956 to 73201988 32 + TSS region transcription start site region 94048
Tssr94049 10 73202152 to 73202162 10 + TSS region transcription start site region 94049
Tssr98090 10 73202469 to 73202477 8 - TSS region transcription start site region 98090
Tssr94050 10 73223747 to 73223751 4 + TSS region transcription start site region 94050
Gm47098 10 73275737 to 73276086 349 + pseudogene predicted gene, 47098
Tssr98091 10 73282182 to 73282187 5 - TSS region transcription start site region 98091
D10Mit307 10 73301396 to 73301536 140 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-307
Tssr98092 10 73326987 to 73326996 9 - TSS region transcription start site region 98092
Gm19168 10 73375490 to 73376019 529 - pseudogene predicted gene, 19168
Gm15397 10 73489974 to 73518390 28416 + sense intronic lncRNA gene predicted gene 15397
D10Mit199.1 10 73530776 to 73530897 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199.1
D10Mit199 10 73530823 to 73531013 190 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199
Gm6407 10 73690257 to 73690805 548 - pseudogene predicted gene 6407
Tssr98093 10 73691008 to 73691011 3 - TSS region transcription start site region 98093
Tssr94051 10 73779605 to 73779611 6 + TSS region transcription start site region 94051
Tssr94052 10 73821857 to 73821871 14 + TSS region transcription start site region 94052
Tssr94053 10 73821898 to 73821914 16 + TSS region transcription start site region 94053
Tssr94054 10 73821937 to 73821951 14 + TSS region transcription start site region 94054
Tssr94055 10 73821958 to 73821973 15 + TSS region transcription start site region 94055
Tssr94056 10 73822177 to 73822193 16 + TSS region transcription start site region 94056
Tssr94057 10 73845348 to 73845352 4 + TSS region transcription start site region 94057
A930019H14Rik 10 73887452 to 73888122 670 unclassified gene RIKEN cDNA A930019H14 gene
Tssr94058 10 73947026 to 73947071 45 + TSS region transcription start site region 94058
Tssr94059 10 74089764 to 74089766 2 + TSS region transcription start site region 94059
Tssr94060 10 74096158 to 74096162 4 + TSS region transcription start site region 94060
Gm40691 10 74127544 to 74136884 9340 - lncRNA gene predicted gene, 40691
Obrq12 10 74151384 to 82655287 8503903 QTL obesity resistance QTL 12
Tssr94061 10 74303105 to 74303155 50 + TSS region transcription start site region 94061
Tssr94062 10 74547864 to 74547888 24 + TSS region transcription start site region 94062
Clfrhl1 10 74612426 to 74612426 0 QTL click-frequency hearing loss 1
Mfhl1 10 74612426 to 74612426 0 QTL medium-frequency hearing loss 1
Lfhl1 10 74612426 to 74612426 0 QTL low-frequency hearing loss 1
Cpgi1713 10 74645521 to 74646008 487 CpG island CpG island 1713
Gm7034 10 74820722 to 74821366 644 + pseudogene predicted gene 7034
Gm6419 10 74862988 to 74863416 428 - pseudogene predicted gene 6419
Tssr98094 10 74863509 to 74863513 4 - TSS region transcription start site region 98094
D10Mit64 10 74874441 to 74874606 165 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 64
Cpgi1714 10 74925382 to 74925857 475 CpG island CpG island 1714
Rsph14 10 74957477 to 75032586 75109 - protein coding gene radial spoke head homolog 14 (Chlamydomonas)
Cpgi1715 10 74966572 to 74968186 1614 CpG island CpG island 1715
Tssr94063 10 74967084 to 74967098 14 + TSS region transcription start site region 94063
Tssr94064 10 74967127 to 74967162 35 + TSS region transcription start site region 94064
Tssr94065 10 74967164 to 74967203 39 + TSS region transcription start site region 94065
Gnaz 10 74967177 to 75016907 49730 + protein coding gene guanine nucleotide binding protein, alpha z subunit
Tssr94066 10 74978632 to 74978635 3 + TSS region transcription start site region 94066
Tssr94067 10 75015308 to 75015332 24 + TSS region transcription start site region 94067
Tssr98095 10 75032538 to 75032588 50 - TSS region transcription start site region 98095
Gm40692 10 75034345 to 75035027 682 + lncRNA gene predicted gene, 40692
Cpgi1716 10 75036877 to 75037446 569 CpG island CpG island 1716
Rab36 10 75037058 to 75054748 17690 + protein coding gene RAB36, member RAS oncogene family
Tssr94068 10 75037077 to 75037100 23 + TSS region transcription start site region 94068
Tssr94069 10 75037244 to 75037288 44 + TSS region transcription start site region 94069
Tssr94070 10 75037291 to 75037332 41 + TSS region transcription start site region 94070
Tssr98096 10 75052983 to 75053006 23 - TSS region transcription start site region 98096
Tssr98097 10 75053011 to 75053022 11 - TSS region transcription start site region 98097
Cpgi1717 10 75060022 to 75062380 2358 CpG island CpG island 1717
Tssr94071 10 75060551 to 75060628 77 + TSS region transcription start site region 94071
Tssr94072 10 75060823 to 75060848 25 + TSS region transcription start site region 94072
Tssr94073 10 75060885 to 75060901 16 + TSS region transcription start site region 94073
Bcr 10 75060896 to 75184923 124027 + protein coding gene breakpoint cluster region
Tssr94074 10 75098454 to 75098455 1 + TSS region transcription start site region 94074
Pcholq4 10 125680038 to 74151384 -51528654 QTL plasma cholesterol QTL 4
Gluq1 10 125680038 to 74151384 -51528654 QTL blood glucose QTL 1