Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:71797903-73521765

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5080 10 71799105 to 71799847 742 - pseudogene predicted gene 5080
Gm22937 10 71898036 to 71898166 130 + snoRNA gene predicted gene, 22937
Gm40690 10 71962612 to 72005345 42733 + lncRNA gene predicted gene, 40690
1700049L16Rik 10 71980092 to 71980634 542 - pseudogene RIKEN cDNA 1700049L16 gene
Tssr98085 10 71980670 to 71980681 11 - TSS region transcription start site region 98085
Tssr98086 10 71980682 to 71980718 36 - TSS region transcription start site region 98086
Gm47060 10 72019206 to 72019517 311 + pseudogene predicted gene, 47060
D10Mit173 10 72033092 to 72033201 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 173
Gm34609 10 72077759 to 72112438 34679 + lincRNA gene predicted gene, 34609
Gm9923 10 72309321 to 72311156 1835 + pseudogene predicted pseudogene 9923
Gm24984 10 72527550 to 72527682 132 + snoRNA gene predicted gene, 24984
Tssr98087 10 72589346 to 72589349 3 - TSS region transcription start site region 98087
Gm34659 10 72623073 to 72643042 19969 - lncRNA gene predicted gene, 34659
Tssr94036 10 72634325 to 72634334 9 + TSS region transcription start site region 94036
Cpgi1711 10 72654649 to 72655196 547 CpG island CpG island 1711
Tssr98088 10 72654706 to 72654727 21 - TSS region transcription start site region 98088
Zwint 10 72654846 to 72674964 20118 + protein coding gene ZW10 interactor
Tssr94037 10 72654855 to 72654866 11 + TSS region transcription start site region 94037
Tssr94038 10 72654873 to 72654920 47 + TSS region transcription start site region 94038
Tssr94039 10 72657324 to 72657339 15 + TSS region transcription start site region 94039
2610034E01Rik 10 72657903 to 72661765 3862 unclassified gene RIKEN cDNA 2610034E01 gene
Tssr94040 10 72658121 to 72658126 5 + TSS region transcription start site region 94040
Tssr94041 10 72671353 to 72671369 16 + TSS region transcription start site region 94041
Tssr94042 10 72671374 to 72671387 13 + TSS region transcription start site region 94042
Tssr94043 10 72673977 to 72674015 38 + TSS region transcription start site region 94043
Tssr94044 10 72674221 to 72674355 134 + TSS region transcription start site region 94044
D10Mit259 10 72676559 to 72676670 111 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 259
Gm47094 10 72717931 to 72718490 559 + pseudogene predicted gene, 47094
Gm34776 10 72940238 to 72949792 9554 - lincRNA gene predicted gene, 34776
Tssr3245 10 72957947 to 72957949 2 + TSS region transcription start site region 3245
A330049N07Rik 10 72973303 to 73086705 113402 - lincRNA gene RIKEN cDNA A330049N07 gene
D10Mit200 10 73062893 to 73063002 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 200
Tssr98089 10 73086705 to 73086731 26 - TSS region transcription start site region 98089
Cpgi1712 10 73098861 to 73100376 1515 CpG island CpG island 1712
Tssr94045 10 73099154 to 73099177 23 + TSS region transcription start site region 94045
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94046 10 73171316 to 73171345 29 + TSS region transcription start site region 94046
Gm37438 10 73182926 to 73183318 392 - unclassified gene predicted gene, 37438
Gm15398 10 73201399 to 73327175 125776 - lincRNA gene predicted gene 15398
Tssr94047 10 73201525 to 73201527 2 + TSS region transcription start site region 94047
Gm5778 10 73201695 to 73202766 1071 + pseudogene predicted gene 5778
Tssr94048 10 73201956 to 73201988 32 + TSS region transcription start site region 94048
Tssr94049 10 73202152 to 73202162 10 + TSS region transcription start site region 94049
Tssr98090 10 73202469 to 73202477 8 - TSS region transcription start site region 98090
Tssr94050 10 73223747 to 73223751 4 + TSS region transcription start site region 94050
Gm47098 10 73275737 to 73276086 349 + pseudogene predicted gene, 47098
Tssr98091 10 73282182 to 73282187 5 - TSS region transcription start site region 98091
D10Mit307 10 73301396 to 73301536 140 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-307
Tssr98092 10 73326987 to 73326996 9 - TSS region transcription start site region 98092
Gm19168 10 73375490 to 73376019 529 - pseudogene predicted gene, 19168
Gm15397 10 73489974 to 73518390 28416 + sense intronic lncRNA gene predicted gene 15397