Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:71737903-73581765

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5080 10 71799105 to 71799847 742 - pseudogene predicted gene 5080
Gm22937 10 71898036 to 71898166 130 + snoRNA gene predicted gene, 22937
Gm40690 10 71962612 to 72005345 42733 + lncRNA gene predicted gene, 40690
1700049L16Rik 10 71980092 to 71980634 542 - pseudogene RIKEN cDNA 1700049L16 gene
Tssr98085 10 71980670 to 71980681 11 - TSS region transcription start site region 98085
Tssr98086 10 71980682 to 71980718 36 - TSS region transcription start site region 98086
Gm47060 10 72019206 to 72019517 311 + pseudogene predicted gene, 47060
D10Mit173 10 72033092 to 72033201 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 173
Gm34609 10 72077759 to 72112438 34679 + lincRNA gene predicted gene, 34609
Gm9923 10 72309321 to 72311156 1835 + pseudogene predicted pseudogene 9923
Gm24984 10 72527550 to 72527682 132 + snoRNA gene predicted gene, 24984
Tssr98087 10 72589346 to 72589349 3 - TSS region transcription start site region 98087
Gm34659 10 72623073 to 72643042 19969 - lncRNA gene predicted gene, 34659
Tssr94036 10 72634325 to 72634334 9 + TSS region transcription start site region 94036
Cpgi1711 10 72654649 to 72655196 547 CpG island CpG island 1711
Tssr98088 10 72654706 to 72654727 21 - TSS region transcription start site region 98088
Zwint 10 72654846 to 72674964 20118 + protein coding gene ZW10 interactor
Tssr94037 10 72654855 to 72654866 11 + TSS region transcription start site region 94037
Tssr94038 10 72654873 to 72654920 47 + TSS region transcription start site region 94038
Tssr94039 10 72657324 to 72657339 15 + TSS region transcription start site region 94039
2610034E01Rik 10 72657903 to 72661765 3862 unclassified gene RIKEN cDNA 2610034E01 gene
Tssr94040 10 72658121 to 72658126 5 + TSS region transcription start site region 94040
Tssr94041 10 72671353 to 72671369 16 + TSS region transcription start site region 94041
Tssr94042 10 72671374 to 72671387 13 + TSS region transcription start site region 94042
Tssr94043 10 72673977 to 72674015 38 + TSS region transcription start site region 94043
Tssr94044 10 72674221 to 72674355 134 + TSS region transcription start site region 94044
D10Mit259 10 72676559 to 72676670 111 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 259
Gm47094 10 72717931 to 72718490 559 + pseudogene predicted gene, 47094
Gm34776 10 72940238 to 72949792 9554 - lincRNA gene predicted gene, 34776
Tssr3245 10 72957947 to 72957949 2 + TSS region transcription start site region 3245
A330049N07Rik 10 72973303 to 73086705 113402 - lincRNA gene RIKEN cDNA A330049N07 gene
D10Mit200 10 73062893 to 73063002 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 200
Tssr98089 10 73086705 to 73086731 26 - TSS region transcription start site region 98089
Cpgi1712 10 73098861 to 73100376 1515 CpG island CpG island 1712
Tssr94045 10 73099154 to 73099177 23 + TSS region transcription start site region 94045
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94046 10 73171316 to 73171345 29 + TSS region transcription start site region 94046
Gm37438 10 73182926 to 73183318 392 - unclassified gene predicted gene, 37438
Gm15398 10 73201399 to 73327175 125776 - lincRNA gene predicted gene 15398
Tssr94047 10 73201525 to 73201527 2 + TSS region transcription start site region 94047
Gm5778 10 73201695 to 73202766 1071 + pseudogene predicted gene 5778
Tssr94048 10 73201956 to 73201988 32 + TSS region transcription start site region 94048
Tssr94049 10 73202152 to 73202162 10 + TSS region transcription start site region 94049
Tssr98090 10 73202469 to 73202477 8 - TSS region transcription start site region 98090
Tssr94050 10 73223747 to 73223751 4 + TSS region transcription start site region 94050
Gm47098 10 73275737 to 73276086 349 + pseudogene predicted gene, 47098
Tssr98091 10 73282182 to 73282187 5 - TSS region transcription start site region 98091
D10Mit307 10 73301396 to 73301536 140 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-307
Tssr98092 10 73326987 to 73326996 9 - TSS region transcription start site region 98092
Gm19168 10 73375490 to 73376019 529 - pseudogene predicted gene, 19168
Gm15397 10 73489974 to 73518390 28416 + sense intronic lncRNA gene predicted gene 15397
D10Mit199.1 10 73530776 to 73530897 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199.1
D10Mit199 10 73530823 to 73531013 190 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199