Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:71249608-72083578

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1705 10 71250637 to 71250860 223 CpG island CpG island 1705
Ube2d1 10 71254980 to 71285262 30282 - protein coding gene ubiquitin-conjugating enzyme E2D 1
Cpgi1706 10 71284590 to 71285847 1257 CpG island CpG island 1706
Tssr98073 10 71285189 to 71285200 11 - TSS region transcription start site region 98073
Tssr98074 10 71285206 to 71285229 23 - TSS region transcription start site region 98074
Tssr98075 10 71285234 to 71285245 11 - TSS region transcription start site region 98075
Tssr98076 10 71285253 to 71285264 11 - TSS region transcription start site region 98076
Tssr98077 10 71285268 to 71285279 11 - TSS region transcription start site region 98077
Tssr98078 10 71285427 to 71285445 18 - TSS region transcription start site region 98078
Gm34376 10 71287735 to 71292240 4505 + lincRNA gene predicted gene, 34376
Cpgi1707 10 71300237 to 71300406 169 CpG island CpG island 1707
Gm20609 10 71310745 to 71313977 3232 + lincRNA gene predicted gene 20609
Rpl19-ps2 10 71318766 to 71319355 589 + pseudogene ribosomal protein L19, pseudogene 2
Cisd1 10 71330494 to 71344849 14355 - protein coding gene CDGSH iron sulfur domain 1
4932439E07Rik 10 71336701 to 71339622 2921 unclassified gene RIKEN cDNA 4932439E07 gene
Tssr98079 10 71343207 to 71343215 8 - TSS region transcription start site region 98079
Cpgi1708 10 71344391 to 71345423 1032 CpG island CpG island 1708
Tssr98080 10 71344785 to 71344790 5 - TSS region transcription start site region 98080
Tssr98081 10 71344795 to 71344881 86 - TSS region transcription start site region 98081
Tssr98082 10 71344882 to 71344893 11 - TSS region transcription start site region 98082
Tssr98083 10 71344916 to 71344927 11 - TSS region transcription start site region 98083
Tssr98084 10 71344933 to 71344948 15 - TSS region transcription start site region 98084
Cpgi1709 10 71347374 to 71348709 1335 CpG island CpG island 1709
Tssr94028 10 71347736 to 71347763 27 + TSS region transcription start site region 94028
Ipmk 10 71347766 to 71385885 38119 + protein coding gene inositol polyphosphate multikinase
Tssr94029 10 71347778 to 71347813 35 + TSS region transcription start site region 94029
Tssr94030 10 71347829 to 71347843 14 + TSS region transcription start site region 94030
Cpgi1710 10 71381420 to 71381831 411 CpG island CpG island 1710
Tssr94031 10 71388501 to 71388505 4 + TSS region transcription start site region 94031
4930551I15Rik 10 71476405 to 71485520 9115 - lincRNA gene RIKEN cDNA 4930551I15 gene
Tssr94032 10 71478605 to 71478608 3 + TSS region transcription start site region 94032
Tssr94033 10 71482984 to 71483009 25 + TSS region transcription start site region 94033
Gm46233 10 71483081 to 71483529 448 + pseudogene predicted gene, 46233
Gm47028 10 71520443 to 71522298 1855 - lincRNA gene predicted gene, 47028
Gm34486 10 71527266 to 71565366 38100 + lncRNA gene predicted gene, 34486
Tssr94034 10 71527293 to 71527325 32 + TSS region transcription start site region 94034
Gm4797 10 71595850 to 71597129 1279 - pseudogene predicted gene 4797
Gm19074 10 71611647 to 71613075 1428 - pseudogene predicted gene, 19074
Tssr3244 10 71662721 to 71662724 3 + TSS region transcription start site region 3244
Gm34544 10 71664608 to 71668578 3970 + lincRNA gene predicted gene, 34544
Gm47045 10 71703721 to 71704173 452 + pseudogene predicted gene, 47045
Tssr94035 10 71704282 to 71704294 12 + TSS region transcription start site region 94035
Gm4798 10 71704290 to 71705988 1698 + pseudogene predicted pseudogene 4798
Gm6362 10 71716922 to 71717757 835 - pseudogene predicted gene 6362
Gm5080 10 71799105 to 71799847 742 - pseudogene predicted gene 5080
Gm22937 10 71898036 to 71898166 130 + snoRNA gene predicted gene, 22937
Gm40690 10 71962612 to 72005345 42733 + lncRNA gene predicted gene, 40690
1700049L16Rik 10 71980092 to 71980634 542 - pseudogene RIKEN cDNA 1700049L16 gene
Tssr98085 10 71980670 to 71980681 11 - TSS region transcription start site region 98085
Tssr98086 10 71980682 to 71980718 36 - TSS region transcription start site region 98086
Gm47060 10 72019206 to 72019517 311 + pseudogene predicted gene, 47060
D10Mit173 10 72033092 to 72033201 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 173
Gm34609 10 72077759 to 72112438 34679 + lincRNA gene predicted gene, 34609