Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:71197735-71382240

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34328 10 71181166 to 71201144 19978 + lncRNA gene predicted gene, 34328
1700113B09Rik 10 71201745 to 71204488 2743 + lincRNA gene RIKEN cDNA 1700113B09 gene
Cpgi1703 10 71217834 to 71218005 171 CpG island CpG island 1703
Tfam 10 71225464 to 71238280 12816 - protein coding gene transcription factor A, mitochondrial
Tssr98069 10 71235317 to 71235339 22 - TSS region transcription start site region 98069
Cpgi1704 10 71237488 to 71238486 998 CpG island CpG island 1704
Tssr98070 10 71238007 to 71238024 17 - TSS region transcription start site region 98070
Tssr98071 10 71238035 to 71238084 49 - TSS region transcription start site region 98071
Tssr98072 10 71238274 to 71238288 14 - TSS region transcription start site region 98072
Cpgi1705 10 71250637 to 71250860 223 CpG island CpG island 1705
Ube2d1 10 71254980 to 71285262 30282 - protein coding gene ubiquitin-conjugating enzyme E2D 1
Cpgi1706 10 71284590 to 71285847 1257 CpG island CpG island 1706
Tssr98073 10 71285189 to 71285200 11 - TSS region transcription start site region 98073
Tssr98074 10 71285206 to 71285229 23 - TSS region transcription start site region 98074
Tssr98075 10 71285234 to 71285245 11 - TSS region transcription start site region 98075
Tssr98076 10 71285253 to 71285264 11 - TSS region transcription start site region 98076
Tssr98077 10 71285268 to 71285279 11 - TSS region transcription start site region 98077
Tssr98078 10 71285427 to 71285445 18 - TSS region transcription start site region 98078
Gm34376 10 71287735 to 71292240 4505 + lincRNA gene predicted gene, 34376
Cpgi1707 10 71300237 to 71300406 169 CpG island CpG island 1707
Gm20609 10 71310745 to 71313977 3232 + lincRNA gene predicted gene 20609
Rpl19-ps2 10 71318766 to 71319355 589 + pseudogene ribosomal protein L19, pseudogene 2
Cisd1 10 71330494 to 71344849 14355 - protein coding gene CDGSH iron sulfur domain 1
4932439E07Rik 10 71336701 to 71339622 2921 unclassified gene RIKEN cDNA 4932439E07 gene
Tssr98079 10 71343207 to 71343215 8 - TSS region transcription start site region 98079
Cpgi1708 10 71344391 to 71345423 1032 CpG island CpG island 1708
Tssr98080 10 71344785 to 71344790 5 - TSS region transcription start site region 98080
Tssr98081 10 71344795 to 71344881 86 - TSS region transcription start site region 98081
Tssr98082 10 71344882 to 71344893 11 - TSS region transcription start site region 98082
Tssr98083 10 71344916 to 71344927 11 - TSS region transcription start site region 98083
Tssr98084 10 71344933 to 71344948 15 - TSS region transcription start site region 98084
Cpgi1709 10 71347374 to 71348709 1335 CpG island CpG island 1709
Tssr94028 10 71347736 to 71347763 27 + TSS region transcription start site region 94028
Ipmk 10 71347766 to 71385885 38119 + protein coding gene inositol polyphosphate multikinase
Tssr94029 10 71347778 to 71347813 35 + TSS region transcription start site region 94029
Tssr94030 10 71347829 to 71347843 14 + TSS region transcription start site region 94030
Cpgi1710 10 71381420 to 71381831 411 CpG island CpG island 1710