Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:70379873-74929920

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202 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47946 10 70412460 to 70415581 3121 - lincRNA gene predicted gene, 47946
Cpgi1698 10 70440233 to 70441072 839 CpG island CpG island 1698
Fam13c 10 70440481 to 70558736 118255 + protein coding gene family with sequence similarity 13, member C
Tssr94019 10 70440643 to 70440672 29 + TSS region transcription start site region 94019
Tssr94020 10 70440676 to 70440720 44 + TSS region transcription start site region 94020
Tssr94021 10 70440844 to 70440937 93 + TSS region transcription start site region 94021
Gm22320 10 70501192 to 70501503 311 - unclassified non-coding RNA gene predicted gene, 22320
Gm29783 10 70504880 to 70505248 368 - pseudogene predicted gene, 29783
Cpgi1699 10 70520422 to 70521000 578 CpG island CpG island 1699
Tssr94022 10 70520478 to 70520489 11 + TSS region transcription start site region 94022
Phyhipl 10 70557686 to 70599291 41605 - protein coding gene phytanoyl-CoA hydroxylase interacting protein-like
Tssr98042 10 70559221 to 70559256 35 - TSS region transcription start site region 98042
Tssr98043 10 70559413 to 70559430 17 - TSS region transcription start site region 98043
Tssr3242 10 70592771 to 70592776 5 - TSS region transcription start site region 3242
Tssr98044 10 70592782 to 70592848 66 - TSS region transcription start site region 98044
Tssr98045 10 70592860 to 70592865 5 - TSS region transcription start site region 98045
Cpgi1700 10 70598471 to 70600384 1913 CpG island CpG island 1700
Tssr98046 10 70599271 to 70599282 11 - TSS region transcription start site region 98046
Tssr98047 10 70599284 to 70599301 17 - TSS region transcription start site region 98047
Tssr3243 10 70599309 to 70599312 3 - TSS region transcription start site region 3243
Tssr98048 10 70599314 to 70599323 9 - TSS region transcription start site region 98048
Gm46232 10 70599778 to 70680214 80436 + lncRNA gene predicted gene, 46232
Tssr94023 10 70599814 to 70599836 22 + TSS region transcription start site region 94023
BB187676 10 70599825 to 70600477 652 unclassified gene expressed sequence BB187676
D630013N20Rik 10 70601049 to 70655963 54914 - lncRNA gene RIKEN cDNA D630013N20 gene
Tssr98049 10 70606036 to 70606042 6 - TSS region transcription start site region 98049
Gm40688 10 70626728 to 70635263 8535 + lncRNA gene predicted gene, 40688
Tssr98050 10 70644695 to 70644707 12 - TSS region transcription start site region 98050
Tssr98051 10 70644875 to 70644888 13 - TSS region transcription start site region 98051
Tssr98052 10 70644897 to 70644907 10 - TSS region transcription start site region 98052
Tssr98053 10 70655934 to 70655972 38 - TSS region transcription start site region 98053
Gm33979 10 70714928 to 70738844 23916 - lincRNA gene predicted gene, 33979
Gm48021 10 70807242 to 70813822 6580 + lincRNA gene predicted gene, 48021
Gm48022 10 70813845 to 70816052 2207 + lincRNA gene predicted gene, 48022
Cpgi1701 10 70830753 to 70831032 279 CpG island CpG island 1701
Gm40689 10 70830755 to 70837863 7108 + lincRNA gene predicted gene, 40689
Tssr94024 10 70837679 to 70837683 4 + TSS region transcription start site region 94024
Gm48023 10 70847017 to 70853726 6709 + lincRNA gene predicted gene, 48023
Gm48024 10 70863399 to 70868452 5053 - lincRNA gene predicted gene, 48024
4930533K18Rik 10 70868621 to 70910761 42140 + antisense lncRNA gene RIKEN cDNA 4930533K18 gene
Tssr94025 10 70868633 to 70868652 19 + TSS region transcription start site region 94025
Gm48036 10 70869997 to 70872420 2423 - lincRNA gene predicted gene, 48036
Gm24486 10 70882104 to 70882210 106 + snRNA gene predicted gene, 24486
Bicc1 10 70922837 to 71159690 236853 - protein coding gene BicC family RNA binding protein 1
Tssr98054 10 70923786 to 70923805 19 - TSS region transcription start site region 98054
Gm48025 10 70975506 to 70993040 17534 - sense intronic lncRNA gene predicted gene, 48025
Tssr98055 10 71058520 to 71058524 4 - TSS region transcription start site region 98055
Tssr98056 10 71069837 to 71069839 2 - TSS region transcription start site region 98056
Gm15647 10 71082876 to 71083651 775 + antisense lncRNA gene predicted gene 15647
Tssr98057 10 71115156 to 71115160 4 - TSS region transcription start site region 98057
Gm34137 10 71125656 to 71141572 15916 + lncRNA gene predicted gene, 34137
Tssr94026 10 71131540 to 71131561 21 + TSS region transcription start site region 94026
Tssr98058 10 71143529 to 71143554 25 - TSS region transcription start site region 98058
Tssr98059 10 71143626 to 71143630 4 - TSS region transcription start site region 98059
Gm32025 10 71148160 to 71148466 306 + pseudogene predicted gene, 32025
Tssr98060 10 71156440 to 71156443 3 - TSS region transcription start site region 98060
Cpgi1702 10 71158961 to 71160173 1212 CpG island CpG island 1702
Tssr98061 10 71158971 to 71158972 1 - TSS region transcription start site region 98061
Tssr98062 10 71159574 to 71159581 7 - TSS region transcription start site region 98062
Tssr98063 10 71159657 to 71159671 14 - TSS region transcription start site region 98063
Tssr98064 10 71159676 to 71159708 32 - TSS region transcription start site region 98064
Tssr98065 10 71159716 to 71159734 18 - TSS region transcription start site region 98065
Tssr98066 10 71159809 to 71159829 20 - TSS region transcription start site region 98066
Tssr98067 10 71159830 to 71159868 38 - TSS region transcription start site region 98067
Gm6331 10 71162928 to 71163377 449 + pseudogene predicted gene 6331
C730027H18Rik 10 71168737 to 71182040 13303 - lincRNA gene RIKEN cDNA C730027H18 gene
Gm34328 10 71181166 to 71201144 19978 + lncRNA gene predicted gene, 34328
Tssr94027 10 71181355 to 71181398 43 + TSS region transcription start site region 94027
Tssr98068 10 71182017 to 71182058 41 - TSS region transcription start site region 98068
1700113B09Rik 10 71201745 to 71204488 2743 + lincRNA gene RIKEN cDNA 1700113B09 gene
Cpgi1703 10 71217834 to 71218005 171 CpG island CpG island 1703
Tfam 10 71225464 to 71238280 12816 - protein coding gene transcription factor A, mitochondrial
Tssr98069 10 71235317 to 71235339 22 - TSS region transcription start site region 98069
Cpgi1704 10 71237488 to 71238486 998 CpG island CpG island 1704
Tssr98070 10 71238007 to 71238024 17 - TSS region transcription start site region 98070
Tssr98071 10 71238035 to 71238084 49 - TSS region transcription start site region 98071
Tssr98072 10 71238274 to 71238288 14 - TSS region transcription start site region 98072
Cpgi1705 10 71250637 to 71250860 223 CpG island CpG island 1705
Ube2d1 10 71254980 to 71285262 30282 - protein coding gene ubiquitin-conjugating enzyme E2D 1
Cpgi1706 10 71284590 to 71285847 1257 CpG island CpG island 1706
Tssr98073 10 71285189 to 71285200 11 - TSS region transcription start site region 98073
Tssr98074 10 71285206 to 71285229 23 - TSS region transcription start site region 98074
Tssr98075 10 71285234 to 71285245 11 - TSS region transcription start site region 98075
Tssr98076 10 71285253 to 71285264 11 - TSS region transcription start site region 98076
Tssr98077 10 71285268 to 71285279 11 - TSS region transcription start site region 98077
Tssr98078 10 71285427 to 71285445 18 - TSS region transcription start site region 98078
Gm34376 10 71287735 to 71292240 4505 + lincRNA gene predicted gene, 34376
Cpgi1707 10 71300237 to 71300406 169 CpG island CpG island 1707
Gm20609 10 71310745 to 71313977 3232 + lincRNA gene predicted gene 20609
Rpl19-ps2 10 71318766 to 71319355 589 + pseudogene ribosomal protein L19, pseudogene 2
Cisd1 10 71330494 to 71344849 14355 - protein coding gene CDGSH iron sulfur domain 1
4932439E07Rik 10 71336701 to 71339622 2921 unclassified gene RIKEN cDNA 4932439E07 gene
Tssr98079 10 71343207 to 71343215 8 - TSS region transcription start site region 98079
Cpgi1708 10 71344391 to 71345423 1032 CpG island CpG island 1708
Tssr98080 10 71344785 to 71344790 5 - TSS region transcription start site region 98080
Tssr98081 10 71344795 to 71344881 86 - TSS region transcription start site region 98081
Tssr98082 10 71344882 to 71344893 11 - TSS region transcription start site region 98082
Tssr98083 10 71344916 to 71344927 11 - TSS region transcription start site region 98083
Tssr98084 10 71344933 to 71344948 15 - TSS region transcription start site region 98084
Cpgi1709 10 71347374 to 71348709 1335 CpG island CpG island 1709
Tssr94028 10 71347736 to 71347763 27 + TSS region transcription start site region 94028
Ipmk 10 71347766 to 71385885 38119 + protein coding gene inositol polyphosphate multikinase
Tssr94029 10 71347778 to 71347813 35 + TSS region transcription start site region 94029
Tssr94030 10 71347829 to 71347843 14 + TSS region transcription start site region 94030
Cpgi1710 10 71381420 to 71381831 411 CpG island CpG island 1710
Tssr94031 10 71388501 to 71388505 4 + TSS region transcription start site region 94031
4930551I15Rik 10 71476405 to 71485520 9115 - lincRNA gene RIKEN cDNA 4930551I15 gene
Tssr94032 10 71478605 to 71478608 3 + TSS region transcription start site region 94032
Tssr94033 10 71482984 to 71483009 25 + TSS region transcription start site region 94033
Gm46233 10 71483081 to 71483529 448 + pseudogene predicted gene, 46233
Gm47028 10 71520443 to 71522298 1855 - lincRNA gene predicted gene, 47028
Gm34486 10 71527266 to 71565366 38100 + lncRNA gene predicted gene, 34486
Tssr94034 10 71527293 to 71527325 32 + TSS region transcription start site region 94034
Gm4797 10 71595850 to 71597129 1279 - pseudogene predicted gene 4797
Gm19074 10 71611647 to 71613075 1428 - pseudogene predicted gene, 19074
Tssr3244 10 71662721 to 71662724 3 + TSS region transcription start site region 3244
Gm34544 10 71664608 to 71668578 3970 + lincRNA gene predicted gene, 34544
Gm47045 10 71703721 to 71704173 452 + pseudogene predicted gene, 47045
Tssr94035 10 71704282 to 71704294 12 + TSS region transcription start site region 94035
Gm4798 10 71704290 to 71705988 1698 + pseudogene predicted pseudogene 4798
Gm6362 10 71716922 to 71717757 835 - pseudogene predicted gene 6362
Gm5080 10 71799105 to 71799847 742 - pseudogene predicted gene 5080
Gm22937 10 71898036 to 71898166 130 + snoRNA gene predicted gene, 22937
Gm40690 10 71962612 to 72005345 42733 + lncRNA gene predicted gene, 40690
1700049L16Rik 10 71980092 to 71980634 542 - pseudogene RIKEN cDNA 1700049L16 gene
Tssr98085 10 71980670 to 71980681 11 - TSS region transcription start site region 98085
Tssr98086 10 71980682 to 71980718 36 - TSS region transcription start site region 98086
Gm47060 10 72019206 to 72019517 311 + pseudogene predicted gene, 47060
D10Mit173 10 72033092 to 72033201 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 173
Gm34609 10 72077759 to 72112438 34679 + lincRNA gene predicted gene, 34609
Gm9923 10 72309321 to 72311156 1835 + pseudogene predicted pseudogene 9923
Gm24984 10 72527550 to 72527682 132 + snoRNA gene predicted gene, 24984
Tssr98087 10 72589346 to 72589349 3 - TSS region transcription start site region 98087
Gm34659 10 72623073 to 72643042 19969 - lncRNA gene predicted gene, 34659
Tssr94036 10 72634325 to 72634334 9 + TSS region transcription start site region 94036
Cpgi1711 10 72654649 to 72655196 547 CpG island CpG island 1711
Tssr98088 10 72654706 to 72654727 21 - TSS region transcription start site region 98088
Zwint 10 72654846 to 72674964 20118 + protein coding gene ZW10 interactor
Tssr94037 10 72654855 to 72654866 11 + TSS region transcription start site region 94037
Tssr94038 10 72654873 to 72654920 47 + TSS region transcription start site region 94038
Tssr94039 10 72657324 to 72657339 15 + TSS region transcription start site region 94039
2610034E01Rik 10 72657903 to 72661765 3862 unclassified gene RIKEN cDNA 2610034E01 gene
Tssr94040 10 72658121 to 72658126 5 + TSS region transcription start site region 94040
Tssr94041 10 72671353 to 72671369 16 + TSS region transcription start site region 94041
Tssr94042 10 72671374 to 72671387 13 + TSS region transcription start site region 94042
Tssr94043 10 72673977 to 72674015 38 + TSS region transcription start site region 94043
Tssr94044 10 72674221 to 72674355 134 + TSS region transcription start site region 94044
D10Mit259 10 72676559 to 72676670 111 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 259
Gm47094 10 72717931 to 72718490 559 + pseudogene predicted gene, 47094
Gm34776 10 72940238 to 72949792 9554 - lincRNA gene predicted gene, 34776
Tssr3245 10 72957947 to 72957949 2 + TSS region transcription start site region 3245
A330049N07Rik 10 72973303 to 73086705 113402 - lincRNA gene RIKEN cDNA A330049N07 gene
D10Mit200 10 73062893 to 73063002 109 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 200
Tssr98089 10 73086705 to 73086731 26 - TSS region transcription start site region 98089
Cpgi1712 10 73098861 to 73100376 1515 CpG island CpG island 1712
Tssr94045 10 73099154 to 73099177 23 + TSS region transcription start site region 94045
Pcdh15 10 73099342 to 74649737 1550395 + protein coding gene protocadherin 15
Tssr94046 10 73171316 to 73171345 29 + TSS region transcription start site region 94046
Gm37438 10 73182926 to 73183318 392 - unclassified gene predicted gene, 37438
Gm15398 10 73201399 to 73327175 125776 - lincRNA gene predicted gene 15398
Tssr94047 10 73201525 to 73201527 2 + TSS region transcription start site region 94047
Gm5778 10 73201695 to 73202766 1071 + pseudogene predicted gene 5778
Tssr94048 10 73201956 to 73201988 32 + TSS region transcription start site region 94048
Tssr94049 10 73202152 to 73202162 10 + TSS region transcription start site region 94049
Tssr98090 10 73202469 to 73202477 8 - TSS region transcription start site region 98090
Tssr94050 10 73223747 to 73223751 4 + TSS region transcription start site region 94050
Gm47098 10 73275737 to 73276086 349 + pseudogene predicted gene, 47098
Tssr98091 10 73282182 to 73282187 5 - TSS region transcription start site region 98091
D10Mit307 10 73301396 to 73301536 140 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-307
Tssr98092 10 73326987 to 73326996 9 - TSS region transcription start site region 98092
Gm19168 10 73375490 to 73376019 529 - pseudogene predicted gene, 19168
Gm15397 10 73489974 to 73518390 28416 + sense intronic lncRNA gene predicted gene 15397
D10Mit199.1 10 73530776 to 73530897 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199.1
D10Mit199 10 73530823 to 73531013 190 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 199
Gm6407 10 73690257 to 73690805 548 - pseudogene predicted gene 6407
Tssr98093 10 73691008 to 73691011 3 - TSS region transcription start site region 98093
Tssr94051 10 73779605 to 73779611 6 + TSS region transcription start site region 94051
Tssr94052 10 73821857 to 73821871 14 + TSS region transcription start site region 94052
Tssr94053 10 73821898 to 73821914 16 + TSS region transcription start site region 94053
Tssr94054 10 73821937 to 73821951 14 + TSS region transcription start site region 94054
Tssr94055 10 73821958 to 73821973 15 + TSS region transcription start site region 94055
Tssr94056 10 73822177 to 73822193 16 + TSS region transcription start site region 94056
Tssr94057 10 73845348 to 73845352 4 + TSS region transcription start site region 94057
A930019H14Rik 10 73887452 to 73888122 670 unclassified gene RIKEN cDNA A930019H14 gene
Tssr94058 10 73947026 to 73947071 45 + TSS region transcription start site region 94058
Tssr94059 10 74089764 to 74089766 2 + TSS region transcription start site region 94059
Tssr94060 10 74096158 to 74096162 4 + TSS region transcription start site region 94060
Gm40691 10 74127544 to 74136884 9340 - lncRNA gene predicted gene, 40691
Obrq12 10 74151384 to 82655287 8503903 QTL obesity resistance QTL 12
Tssr94061 10 74303105 to 74303155 50 + TSS region transcription start site region 94061
Tssr94062 10 74547864 to 74547888 24 + TSS region transcription start site region 94062
Mfhl1 10 74612426 to 74612426 0 QTL medium-frequency hearing loss 1
Clfrhl1 10 74612426 to 74612426 0 QTL click-frequency hearing loss 1
Lfhl1 10 74612426 to 74612426 0 QTL low-frequency hearing loss 1
Cpgi1713 10 74645521 to 74646008 487 CpG island CpG island 1713
Gm7034 10 74820722 to 74821366 644 + pseudogene predicted gene 7034
Gm6419 10 74862988 to 74863416 428 - pseudogene predicted gene 6419
Tssr98094 10 74863509 to 74863513 4 - TSS region transcription start site region 98094
D10Mit64 10 74874441 to 74874606 165 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 64
Cpgi1714 10 74925382 to 74925857 475 CpG island CpG island 1714