Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:69405507-70165523

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4833431D13Rik 10 69396956 to 69602137 205181 unclassified non-coding RNA gene RIKEN cDNA 4833431D13 gene
D10Jor1 10 69410942 to 69411223 281 DNA segment DNA segment, Chr 10, Barbara Jordan 1
Tssr93935 10 69417564 to 69417583 19 + TSS region transcription start site region 93935
Gm18636 10 69422683 to 69423748 1065 - pseudogene predicted gene, 18636
A930011B18Rik 10 69439004 to 69439739 735 unclassified gene RIKEN cDNA A930011B18 gene
Tssr93936 10 69493602 to 69493609 7 + TSS region transcription start site region 93936
Ank3 10 69533580 to 70027436 493856 + protein coding gene ankyrin 3, epithelial
Tssr93937 10 69533593 to 69533632 39 + TSS region transcription start site region 93937
Tssr93938 10 69533633 to 69533666 33 + TSS region transcription start site region 93938
Tssr93939 10 69533668 to 69533682 14 + TSS region transcription start site region 93939
Tssr93940 10 69533702 to 69533723 21 + TSS region transcription start site region 93940
Tssr93941 10 69533761 to 69533776 15 + TSS region transcription start site region 93941
Tssr93942 10 69533803 to 69533848 45 + TSS region transcription start site region 93942
Tssr93943 10 69534025 to 69534038 13 + TSS region transcription start site region 93943
Tssr93944 10 69534039 to 69534070 31 + TSS region transcription start site region 93944
Tssr93945 10 69534102 to 69534156 54 + TSS region transcription start site region 93945
Tssr3235 10 69534184 to 69534202 18 + TSS region transcription start site region 3235
Tssr93946 10 69534209 to 69534218 9 + TSS region transcription start site region 93946
Gm33464 10 69541088 to 69556508 15420 - lncRNA gene predicted gene, 33464
Tssr93947 10 69551156 to 69551181 25 + TSS region transcription start site region 93947
Tssr3236 10 69551294 to 69551305 11 + TSS region transcription start site region 3236
Tssr98034 10 69556451 to 69556461 10 - TSS region transcription start site region 98034
Tssr3237 10 69563753 to 69563760 7 + TSS region transcription start site region 3237
Gm46231 10 69566048 to 69566361 313 - pseudogene predicted gene, 46231
Tssr93948 10 69572674 to 69572689 15 + TSS region transcription start site region 93948
Tssr93949 10 69572981 to 69572997 16 + TSS region transcription start site region 93949
Tssr93950 10 69574668 to 69574673 5 + TSS region transcription start site region 93950
D10Mit32 10 69589010 to 69589241 231 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 32
Tssr93951 10 69630791 to 69630795 4 + TSS region transcription start site region 93951
Tssr93952 10 69681631 to 69681636 5 + TSS region transcription start site region 93952
9430064K01Rik 10 69689083 to 69690175 1092 unclassified gene RIKEN cDNA 9430064K01 gene
Tssr93953 10 69706070 to 69706090 20 + TSS region transcription start site region 93953
Tssr3238 10 69706173 to 69706184 11 + TSS region transcription start site region 3238
Tssr93954 10 69706194 to 69706215 21 + TSS region transcription start site region 93954
Tssr93955 10 69706229 to 69706266 37 + TSS region transcription start site region 93955
Tssr93956 10 69706319 to 69706324 5 + TSS region transcription start site region 93956
Tssr93957 10 69706326 to 69706382 56 + TSS region transcription start site region 93957
Tssr93958 10 69706466 to 69706493 27 + TSS region transcription start site region 93958
Tssr93959 10 69706501 to 69706545 44 + TSS region transcription start site region 93959
Tssr93960 10 69706656 to 69706669 13 + TSS region transcription start site region 93960
Tssr93961 10 69747014 to 69747030 16 + TSS region transcription start site region 93961
Tssr93962 10 69747045 to 69747053 8 + TSS region transcription start site region 93962
Hfhl4 10 69760207 to 69760207 0 QTL high-frequency hearing loss 4
Tssr93963 10 69764653 to 69764669 16 + TSS region transcription start site region 93963
Tssr93964 10 69764933 to 69764942 9 + TSS region transcription start site region 93964
Tssr93965 10 69785507 to 69785523 16 + TSS region transcription start site region 93965
Tssr93966 10 69785605 to 69785637 32 + TSS region transcription start site region 93966
Tssr93967 10 69787391 to 69787402 11 + TSS region transcription start site region 93967
Tssr93968 10 69787431 to 69787458 27 + TSS region transcription start site region 93968
Tssr93969 10 69787513 to 69787537 24 + TSS region transcription start site region 93969
Cpgi1693 10 69822156 to 69822476 320 CpG island CpG island 1693
D10Mit114 10 69841742 to 69841938 196 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 114
Gm33416 10 69862685 to 69866391 3706 - lncRNA gene predicted gene, 33416
Tssr3239 10 69872174 to 69872178 4 + TSS region transcription start site region 3239
D10Mit224 10 69881093 to 69881200 107 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 224
Gm33361 10 69907046 to 69909312 2266 - lncRNA gene predicted gene, 33361
2900006A17Rik 10 69907184 to 69907980 796 unclassified gene RIKEN cDNA 2900006A17 gene
Tssr93970 10 69924136 to 69924151 15 + TSS region transcription start site region 93970
Tssr93971 10 69925484 to 69925502 18 + TSS region transcription start site region 93971
Tssr93972 10 69925766 to 69925786 20 + TSS region transcription start site region 93972
Tssr93973 10 69925800 to 69925824 24 + TSS region transcription start site region 93973
Tssr93974 10 69925829 to 69925853 24 + TSS region transcription start site region 93974
Tssr93975 10 69925855 to 69925870 15 + TSS region transcription start site region 93975
Tssr93976 10 69925978 to 69925985 7 + TSS region transcription start site region 93976
Tssr3240 10 69980333 to 69980348 15 + TSS region transcription start site region 3240
Tssr93977 10 69988472 to 69988476 4 + TSS region transcription start site region 93977
Tssr93978 10 69993102 to 69993117 15 + TSS region transcription start site region 93978
Tssr93979 10 69993289 to 69993300 11 + TSS region transcription start site region 93979
Tssr93980 10 69994389 to 69994412 23 + TSS region transcription start site region 93980
Cpgi1694 10 70004864 to 70005164 300 CpG island CpG island 1694
Tssr93981 10 70006227 to 70006231 4 + TSS region transcription start site region 93981
Tssr93982 10 70024952 to 70024956 4 + TSS region transcription start site region 93982
Tssr93983 10 70025687 to 70025700 13 + TSS region transcription start site region 93983
Tssr93984 10 70026290 to 70026295 5 + TSS region transcription start site region 93984
Cpgi1695 10 70059980 to 70060200 220 CpG island CpG island 1695
Tssr93985 10 70060150 to 70060162 12 + TSS region transcription start site region 93985
Tssr93986 10 70060187 to 70060194 7 + TSS region transcription start site region 93986
Tssr93987 10 70095351 to 70095353 2 + TSS region transcription start site region 93987
Cpgi1696 10 70096479 to 70098276 1797 CpG island CpG island 1696
Tssr98035 10 70096725 to 70096765 40 - TSS region transcription start site region 98035
Tssr93988 10 70096826 to 70096859 33 + TSS region transcription start site region 93988
Tssr93989 10 70096960 to 70096965 5 + TSS region transcription start site region 93989
Tssr93990 10 70097102 to 70097211 109 + TSS region transcription start site region 93990
Ccdc6 10 70097121 to 70193200 96079 + protein coding gene coiled-coil domain containing 6
Tssr93991 10 70097212 to 70097235 23 + TSS region transcription start site region 93991
Tssr3241 10 70097237 to 70097250 13 + TSS region transcription start site region 3241
Tssr93992 10 70097264 to 70097301 37 + TSS region transcription start site region 93992
Tssr93993 10 70110024 to 70110027 3 + TSS region transcription start site region 93993
Tssr93994 10 70110268 to 70110296 28 + TSS region transcription start site region 93994
Tssr93995 10 70110300 to 70110307 7 + TSS region transcription start site region 93995
Tssr93996 10 70111965 to 70111972 7 + TSS region transcription start site region 93996