Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:69253751-69543765

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhobtb1 10 69151434 to 69291791 140357 + protein coding gene Rho-related BTB domain containing 1
Cpgi1687 10 69266111 to 69266321 210 CpG island CpG island 1687
Cpgi1688 10 69269945 to 69270513 568 CpG island CpG island 1688
Tssr3234 10 69275186 to 69275190 4 - TSS region transcription start site region 3234
Tssr93921 10 69280040 to 69280041 1 + TSS region transcription start site region 93921
Cpgi1689 10 69311999 to 69312315 316 CpG island CpG island 1689
Gm40685 10 69312139 to 69315376 3237 + lincRNA gene predicted gene, 40685
Tssr93922 10 69325202 to 69325214 12 + TSS region transcription start site region 93922
Rpl30-ps7 10 69325203 to 69325669 466 + pseudogene ribosomal protein L30, pseudogene 7
4930423B08Rik 10 69326355 to 69328207 1852 - lncRNA gene RIKEN cDNA 4930423B08 gene
Tssr98031 10 69328152 to 69328161 9 - TSS region transcription start site region 98031
Tssr93923 10 69328265 to 69328273 8 + TSS region transcription start site region 93923
Cdk1 10 69336635 to 69352912 16277 - protein coding gene cyclin-dependent kinase 1
Cpgi1690 10 69352043 to 69352452 409 CpG island CpG island 1690
Cpgi1691 10 69352640 to 69353231 591 CpG island CpG island 1691
Tssr98032 10 69352868 to 69352881 13 - TSS region transcription start site region 98032
Tssr98033 10 69352886 to 69352929 43 - TSS region transcription start site region 98033
Gm47211 10 69372689 to 69373312 623 - pseudogene predicted gene, 47211
4833431D13Rik 10 69396956 to 69602137 205181 unclassified non-coding RNA gene RIKEN cDNA 4833431D13 gene
Cpgi1692 10 69398394 to 69399919 1525 CpG island CpG island 1692
Tssr93924 10 69398724 to 69398740 16 + TSS region transcription start site region 93924
Tssr93925 10 69398751 to 69398765 14 + TSS region transcription start site region 93925
Tssr93926 10 69398770 to 69398788 18 + TSS region transcription start site region 93926
Tssr93927 10 69398799 to 69398817 18 + TSS region transcription start site region 93927
Tssr93928 10 69398846 to 69398892 46 + TSS region transcription start site region 93928
Tssr93929 10 69398900 to 69398921 21 + TSS region transcription start site region 93929
Tssr93930 10 69398923 to 69398949 26 + TSS region transcription start site region 93930
Tssr93931 10 69398950 to 69398977 27 + TSS region transcription start site region 93931
Tssr93932 10 69398980 to 69398993 13 + TSS region transcription start site region 93932
Tssr93933 10 69399003 to 69399011 8 + TSS region transcription start site region 93933
Tssr93934 10 69399020 to 69399041 21 + TSS region transcription start site region 93934
D10Jor1 10 69410942 to 69411223 281 DNA segment DNA segment, Chr 10, Barbara Jordan 1
Tssr93935 10 69417564 to 69417583 19 + TSS region transcription start site region 93935
Gm18636 10 69422683 to 69423748 1065 - pseudogene predicted gene, 18636
A930011B18Rik 10 69439004 to 69439739 735 unclassified gene RIKEN cDNA A930011B18 gene
Tssr93936 10 69493602 to 69493609 7 + TSS region transcription start site region 93936
Ank3 10 69533580 to 70027436 493856 + protein coding gene ankyrin 3, epithelial
Tssr93937 10 69533593 to 69533632 39 + TSS region transcription start site region 93937
Tssr93938 10 69533633 to 69533666 33 + TSS region transcription start site region 93938
Tssr93939 10 69533668 to 69533682 14 + TSS region transcription start site region 93939
Tssr93940 10 69533702 to 69533723 21 + TSS region transcription start site region 93940
Tssr93941 10 69533761 to 69533776 15 + TSS region transcription start site region 93941
Tssr93942 10 69533803 to 69533848 45 + TSS region transcription start site region 93942
Tssr93943 10 69534025 to 69534038 13 + TSS region transcription start site region 93943
Tssr93944 10 69534039 to 69534070 31 + TSS region transcription start site region 93944
Tssr93945 10 69534102 to 69534156 54 + TSS region transcription start site region 93945
Tssr3235 10 69534184 to 69534202 18 + TSS region transcription start site region 3235
Tssr93946 10 69534209 to 69534218 9 + TSS region transcription start site region 93946
Gm33464 10 69541088 to 69556508 15420 - lncRNA gene predicted gene, 33464