Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:69246956-69752137

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhobtb1 10 69151434 to 69291791 140357 + protein coding gene Rho-related BTB domain containing 1
Tssr93919 10 69246992 to 69247004 12 + TSS region transcription start site region 93919
Tssr93920 10 69248651 to 69248656 5 + TSS region transcription start site region 93920
Cpgi1687 10 69266111 to 69266321 210 CpG island CpG island 1687
Cpgi1688 10 69269945 to 69270513 568 CpG island CpG island 1688
Tssr3234 10 69275186 to 69275190 4 - TSS region transcription start site region 3234
Tssr93921 10 69280040 to 69280041 1 + TSS region transcription start site region 93921
Cpgi1689 10 69311999 to 69312315 316 CpG island CpG island 1689
Gm40685 10 69312139 to 69315376 3237 + lincRNA gene predicted gene, 40685
Tssr93922 10 69325202 to 69325214 12 + TSS region transcription start site region 93922
Rpl30-ps7 10 69325203 to 69325669 466 + pseudogene ribosomal protein L30, pseudogene 7
4930423B08Rik 10 69326355 to 69328207 1852 - lncRNA gene RIKEN cDNA 4930423B08 gene
Tssr98031 10 69328152 to 69328161 9 - TSS region transcription start site region 98031
Tssr93923 10 69328265 to 69328273 8 + TSS region transcription start site region 93923
Cdk1 10 69336635 to 69352912 16277 - protein coding gene cyclin-dependent kinase 1
Cpgi1690 10 69352043 to 69352452 409 CpG island CpG island 1690
Cpgi1691 10 69352640 to 69353231 591 CpG island CpG island 1691
Tssr98032 10 69352868 to 69352881 13 - TSS region transcription start site region 98032
Tssr98033 10 69352886 to 69352929 43 - TSS region transcription start site region 98033
Gm47211 10 69372689 to 69373312 623 - pseudogene predicted gene, 47211
4833431D13Rik 10 69396956 to 69602137 205181 unclassified non-coding RNA gene RIKEN cDNA 4833431D13 gene
Cpgi1692 10 69398394 to 69399919 1525 CpG island CpG island 1692
Tssr93924 10 69398724 to 69398740 16 + TSS region transcription start site region 93924
Tssr93925 10 69398751 to 69398765 14 + TSS region transcription start site region 93925
Tssr93926 10 69398770 to 69398788 18 + TSS region transcription start site region 93926
Tssr93927 10 69398799 to 69398817 18 + TSS region transcription start site region 93927
Tssr93928 10 69398846 to 69398892 46 + TSS region transcription start site region 93928
Tssr93929 10 69398900 to 69398921 21 + TSS region transcription start site region 93929
Tssr93930 10 69398923 to 69398949 26 + TSS region transcription start site region 93930
Tssr93931 10 69398950 to 69398977 27 + TSS region transcription start site region 93931
Tssr93932 10 69398980 to 69398993 13 + TSS region transcription start site region 93932
Tssr93933 10 69399003 to 69399011 8 + TSS region transcription start site region 93933
Tssr93934 10 69399020 to 69399041 21 + TSS region transcription start site region 93934
D10Jor1 10 69410942 to 69411223 281 DNA segment DNA segment, Chr 10, Barbara Jordan 1
Tssr93935 10 69417564 to 69417583 19 + TSS region transcription start site region 93935
Gm18636 10 69422683 to 69423748 1065 - pseudogene predicted gene, 18636
A930011B18Rik 10 69439004 to 69439739 735 unclassified gene RIKEN cDNA A930011B18 gene
Tssr93936 10 69493602 to 69493609 7 + TSS region transcription start site region 93936
Ank3 10 69533580 to 70027436 493856 + protein coding gene ankyrin 3, epithelial
Tssr93937 10 69533593 to 69533632 39 + TSS region transcription start site region 93937
Tssr93938 10 69533633 to 69533666 33 + TSS region transcription start site region 93938
Tssr93939 10 69533668 to 69533682 14 + TSS region transcription start site region 93939
Tssr93940 10 69533702 to 69533723 21 + TSS region transcription start site region 93940
Tssr93941 10 69533761 to 69533776 15 + TSS region transcription start site region 93941
Tssr93942 10 69533803 to 69533848 45 + TSS region transcription start site region 93942
Tssr93943 10 69534025 to 69534038 13 + TSS region transcription start site region 93943
Tssr93944 10 69534039 to 69534070 31 + TSS region transcription start site region 93944
Tssr93945 10 69534102 to 69534156 54 + TSS region transcription start site region 93945
Tssr3235 10 69534184 to 69534202 18 + TSS region transcription start site region 3235
Tssr93946 10 69534209 to 69534218 9 + TSS region transcription start site region 93946
Gm33464 10 69541088 to 69556508 15420 - lncRNA gene predicted gene, 33464
Tssr93947 10 69551156 to 69551181 25 + TSS region transcription start site region 93947
Tssr3236 10 69551294 to 69551305 11 + TSS region transcription start site region 3236
Tssr98034 10 69556451 to 69556461 10 - TSS region transcription start site region 98034
Tssr3237 10 69563753 to 69563760 7 + TSS region transcription start site region 3237
Gm46231 10 69566048 to 69566361 313 - pseudogene predicted gene, 46231
Tssr93948 10 69572674 to 69572689 15 + TSS region transcription start site region 93948
Tssr93949 10 69572981 to 69572997 16 + TSS region transcription start site region 93949
Tssr93950 10 69574668 to 69574673 5 + TSS region transcription start site region 93950
D10Mit32 10 69589010 to 69589241 231 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 32
Tssr93951 10 69630791 to 69630795 4 + TSS region transcription start site region 93951
Tssr93952 10 69681631 to 69681636 5 + TSS region transcription start site region 93952
9430064K01Rik 10 69689083 to 69690175 1092 unclassified gene RIKEN cDNA 9430064K01 gene
Tssr93953 10 69706070 to 69706090 20 + TSS region transcription start site region 93953
Tssr3238 10 69706173 to 69706184 11 + TSS region transcription start site region 3238
Tssr93954 10 69706194 to 69706215 21 + TSS region transcription start site region 93954
Tssr93955 10 69706229 to 69706266 37 + TSS region transcription start site region 93955
Tssr93956 10 69706319 to 69706324 5 + TSS region transcription start site region 93956
Tssr93957 10 69706326 to 69706382 56 + TSS region transcription start site region 93957
Tssr93958 10 69706466 to 69706493 27 + TSS region transcription start site region 93958
Tssr93959 10 69706501 to 69706545 44 + TSS region transcription start site region 93959
Tssr93960 10 69706656 to 69706669 13 + TSS region transcription start site region 93960
Tssr93961 10 69747014 to 69747030 16 + TSS region transcription start site region 93961
Tssr93962 10 69747045 to 69747053 8 + TSS region transcription start site region 93962