Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:69187689-69558312

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rhobtb1 10 69151434 to 69291791 140357 + protein coding gene Rho-related BTB domain containing 1
Tssr93907 10 69192094 to 69192096 2 + TSS region transcription start site region 93907
Tssr93908 10 69208546 to 69208557 11 + TSS region transcription start site region 93908
A930033H14Rik 10 69209762 to 69213098 3336 - protein coding gene RIKEN cDNA A930033H14 gene
Tssr98028 10 69210093 to 69210120 27 - TSS region transcription start site region 98028
Cpgi1686 10 69212542 to 69213879 1337 CpG island CpG island 1686
Tssr93909 10 69212652 to 69212667 15 + TSS region transcription start site region 93909
Tssr93910 10 69212677 to 69212694 17 + TSS region transcription start site region 93910
Tssr98029 10 69212996 to 69213014 18 - TSS region transcription start site region 98029
Tssr98030 10 69213092 to 69213130 38 - TSS region transcription start site region 98030
Tssr93911 10 69213162 to 69213228 66 + TSS region transcription start site region 93911
Tssr93912 10 69213245 to 69213265 20 + TSS region transcription start site region 93912
Tssr93913 10 69219328 to 69219346 18 + TSS region transcription start site region 93913
Tssr93914 10 69219357 to 69219382 25 + TSS region transcription start site region 93914
Tssr93915 10 69219389 to 69219405 16 + TSS region transcription start site region 93915
Tssr93916 10 69219419 to 69219436 17 + TSS region transcription start site region 93916
Tssr93917 10 69219447 to 69219455 8 + TSS region transcription start site region 93917
Tssr93918 10 69236377 to 69236379 2 + TSS region transcription start site region 93918
Tssr93919 10 69246992 to 69247004 12 + TSS region transcription start site region 93919
Tssr93920 10 69248651 to 69248656 5 + TSS region transcription start site region 93920
Cpgi1687 10 69266111 to 69266321 210 CpG island CpG island 1687
Cpgi1688 10 69269945 to 69270513 568 CpG island CpG island 1688
Tssr3234 10 69275186 to 69275190 4 - TSS region transcription start site region 3234
Tssr93921 10 69280040 to 69280041 1 + TSS region transcription start site region 93921
Cpgi1689 10 69311999 to 69312315 316 CpG island CpG island 1689
Gm40685 10 69312139 to 69315376 3237 + lincRNA gene predicted gene, 40685
Tssr93922 10 69325202 to 69325214 12 + TSS region transcription start site region 93922
Rpl30-ps7 10 69325203 to 69325669 466 + pseudogene ribosomal protein L30, pseudogene 7
4930423B08Rik 10 69326355 to 69328207 1852 - lncRNA gene RIKEN cDNA 4930423B08 gene
Tssr98031 10 69328152 to 69328161 9 - TSS region transcription start site region 98031
Tssr93923 10 69328265 to 69328273 8 + TSS region transcription start site region 93923
Cdk1 10 69336635 to 69352912 16277 - protein coding gene cyclin-dependent kinase 1
Cpgi1690 10 69352043 to 69352452 409 CpG island CpG island 1690
Cpgi1691 10 69352640 to 69353231 591 CpG island CpG island 1691
Tssr98032 10 69352868 to 69352881 13 - TSS region transcription start site region 98032
Tssr98033 10 69352886 to 69352929 43 - TSS region transcription start site region 98033
Gm47211 10 69372689 to 69373312 623 - pseudogene predicted gene, 47211
4833431D13Rik 10 69396956 to 69602137 205181 unclassified non-coding RNA gene RIKEN cDNA 4833431D13 gene
Cpgi1692 10 69398394 to 69399919 1525 CpG island CpG island 1692
Tssr93924 10 69398724 to 69398740 16 + TSS region transcription start site region 93924
Tssr93925 10 69398751 to 69398765 14 + TSS region transcription start site region 93925
Tssr93926 10 69398770 to 69398788 18 + TSS region transcription start site region 93926
Tssr93927 10 69398799 to 69398817 18 + TSS region transcription start site region 93927
Tssr93928 10 69398846 to 69398892 46 + TSS region transcription start site region 93928
Tssr93929 10 69398900 to 69398921 21 + TSS region transcription start site region 93929
Tssr93930 10 69398923 to 69398949 26 + TSS region transcription start site region 93930
Tssr93931 10 69398950 to 69398977 27 + TSS region transcription start site region 93931
Tssr93932 10 69398980 to 69398993 13 + TSS region transcription start site region 93932
Tssr93933 10 69399003 to 69399011 8 + TSS region transcription start site region 93933
Tssr93934 10 69399020 to 69399041 21 + TSS region transcription start site region 93934
D10Jor1 10 69410942 to 69411223 281 DNA segment DNA segment, Chr 10, Barbara Jordan 1
Tssr93935 10 69417564 to 69417583 19 + TSS region transcription start site region 93935
Gm18636 10 69422683 to 69423748 1065 - pseudogene predicted gene, 18636
A930011B18Rik 10 69439004 to 69439739 735 unclassified gene RIKEN cDNA A930011B18 gene
Tssr93936 10 69493602 to 69493609 7 + TSS region transcription start site region 93936
Ank3 10 69533580 to 70027436 493856 + protein coding gene ankyrin 3, epithelial
Tssr93937 10 69533593 to 69533632 39 + TSS region transcription start site region 93937
Tssr93938 10 69533633 to 69533666 33 + TSS region transcription start site region 93938
Tssr93939 10 69533668 to 69533682 14 + TSS region transcription start site region 93939
Tssr93940 10 69533702 to 69533723 21 + TSS region transcription start site region 93940
Tssr93941 10 69533761 to 69533776 15 + TSS region transcription start site region 93941
Tssr93942 10 69533803 to 69533848 45 + TSS region transcription start site region 93942
Tssr93943 10 69534025 to 69534038 13 + TSS region transcription start site region 93943
Tssr93944 10 69534039 to 69534070 31 + TSS region transcription start site region 93944
Tssr93945 10 69534102 to 69534156 54 + TSS region transcription start site region 93945
Tssr3235 10 69534184 to 69534202 18 + TSS region transcription start site region 3235
Tssr93946 10 69534209 to 69534218 9 + TSS region transcription start site region 93946
Gm33464 10 69541088 to 69556508 15420 - lncRNA gene predicted gene, 33464
Tssr93947 10 69551156 to 69551181 25 + TSS region transcription start site region 93947
Tssr3236 10 69551294 to 69551305 11 + TSS region transcription start site region 3236
Tssr98034 10 69556451 to 69556461 10 - TSS region transcription start site region 98034