Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:68266587-68559789

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arid5b 10 68092523 to 68278726 186203 - protein coding gene AT rich interactive domain 5B (MRF1-like)
Tssr98012 10 68270394 to 68270399 5 - TSS region transcription start site region 98012
Tssr98013 10 68276435 to 68276470 35 - TSS region transcription start site region 98013
Cpgi1680 10 68276486 to 68277400 914 CpG island CpG island 1680
Tssr93881 10 68276560 to 68276584 24 + TSS region transcription start site region 93881
Tssr98014 10 68277315 to 68277328 13 - TSS region transcription start site region 98014
Tssr93882 10 68277464 to 68277514 50 + TSS region transcription start site region 93882
Tssr98015 10 68277517 to 68277529 12 - TSS region transcription start site region 98015
Tssr98016 10 68278713 to 68278735 22 - TSS region transcription start site region 98016
Tssr98017 10 68278828 to 68278867 39 - TSS region transcription start site region 98017
Tssr98018 10 68279163 to 68279178 15 - TSS region transcription start site region 98018
Cpgi1681 10 68283100 to 68283323 223 CpG island CpG island 1681
Gm47078 10 68313008 to 68326978 13970 + lincRNA gene predicted gene, 47078
4930545H06Rik 10 68319071 to 68321142 2071 - lincRNA gene RIKEN cDNA 4930545H06 gene
Tssr98019 10 68321075 to 68321089 14 - TSS region transcription start site region 98019
Gm32748 10 68325638 to 68340297 14659 - lncRNA gene predicted gene, 32748
Tssr98020 10 68358437 to 68358469 32 - TSS region transcription start site region 98020
Gm40683 10 68386587 to 68439789 53202 + lncRNA gene predicted gene, 40683
Cabcoco1 10 68430953 to 68541896 110943 - protein coding gene ciliary associated calcium binding coiled-coil 1
Cpgi1682 10 68448113 to 68448380 267 CpG island CpG island 1682
Tssr93883 10 68530095 to 68530101 6 + TSS region transcription start site region 93883
Gm32872 10 68530194 to 68533936 3742 + antisense lncRNA gene predicted gene, 32872
Cpgi1683 10 68541758 to 68542034 276 CpG island CpG island 1683
Tssr98021 10 68541842 to 68541908 66 - TSS region transcription start site region 98021