Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:68233858-69213865

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Arid5b 10 68092523 to 68278726 186203 - protein coding gene AT rich interactive domain 5B (MRF1-like)
Tssr93880 10 68239250 to 68239288 38 + TSS region transcription start site region 93880
Tssr98008 10 68239593 to 68239607 14 - TSS region transcription start site region 98008
Tssr98009 10 68239708 to 68239746 38 - TSS region transcription start site region 98009
Tssr3233 10 68240456 to 68240460 4 - TSS region transcription start site region 3233
Tssr98010 10 68249246 to 68249251 5 - TSS region transcription start site region 98010
Tssr98011 10 68250440 to 68250444 4 - TSS region transcription start site region 98011
Eae17 10 68255660 to 68255809 149 QTL experimental allergic encephalomyelitis susceptibility 17
Ath17 10 68255660 to 68255809 149 QTL atherosclerosis 17
D10Mit31 10 68255660 to 68255809 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 31
Tssr98012 10 68270394 to 68270399 5 - TSS region transcription start site region 98012
Tssr98013 10 68276435 to 68276470 35 - TSS region transcription start site region 98013
Cpgi1680 10 68276486 to 68277400 914 CpG island CpG island 1680
Tssr93881 10 68276560 to 68276584 24 + TSS region transcription start site region 93881
Tssr98014 10 68277315 to 68277328 13 - TSS region transcription start site region 98014
Tssr93882 10 68277464 to 68277514 50 + TSS region transcription start site region 93882
Tssr98015 10 68277517 to 68277529 12 - TSS region transcription start site region 98015
Tssr98016 10 68278713 to 68278735 22 - TSS region transcription start site region 98016
Tssr98017 10 68278828 to 68278867 39 - TSS region transcription start site region 98017
Tssr98018 10 68279163 to 68279178 15 - TSS region transcription start site region 98018
Cpgi1681 10 68283100 to 68283323 223 CpG island CpG island 1681
Gm47078 10 68313008 to 68326978 13970 + lincRNA gene predicted gene, 47078
4930545H06Rik 10 68319071 to 68321142 2071 - lincRNA gene RIKEN cDNA 4930545H06 gene
Tssr98019 10 68321075 to 68321089 14 - TSS region transcription start site region 98019
Gm32748 10 68325638 to 68340297 14659 - lncRNA gene predicted gene, 32748
Tssr98020 10 68358437 to 68358469 32 - TSS region transcription start site region 98020
Gm40683 10 68386587 to 68439789 53202 + lncRNA gene predicted gene, 40683
Cabcoco1 10 68430953 to 68541896 110943 - protein coding gene ciliary associated calcium binding coiled-coil 1
Cpgi1682 10 68448113 to 68448380 267 CpG island CpG island 1682
Tssr93883 10 68530095 to 68530101 6 + TSS region transcription start site region 93883
Gm32872 10 68530194 to 68533936 3742 + antisense lncRNA gene predicted gene, 32872
Cpgi1683 10 68541758 to 68542034 276 CpG island CpG island 1683
Tssr98021 10 68541842 to 68541908 66 - TSS region transcription start site region 98021
Tssr98022 10 68673629 to 68673650 21 - TSS region transcription start site region 98022
Gm7594 10 68691515 to 68692375 860 - pseudogene predicted gene 7594
Tssr93884 10 68723634 to 68723650 16 + TSS region transcription start site region 93884
Cpgi1684 10 68723701 to 68724513 812 CpG island CpG island 1684
Tssr93885 10 68723723 to 68723760 37 + TSS region transcription start site region 93885
Tmem26 10 68723746 to 68782655 58909 + protein coding gene transmembrane protein 26
Tssr93886 10 68723761 to 68723786 25 + TSS region transcription start site region 93886
Tssr93887 10 68723792 to 68723822 30 + TSS region transcription start site region 93887
Tssr93888 10 68723827 to 68723841 14 + TSS region transcription start site region 93888
Tssr93889 10 68723858 to 68723865 7 + TSS region transcription start site region 93889
Tssr93890 10 68723878 to 68723889 11 + TSS region transcription start site region 93890
Tssr93891 10 68723891 to 68723902 11 + TSS region transcription start site region 93891
Tssr93892 10 68723915 to 68723931 16 + TSS region transcription start site region 93892
Tssr93893 10 68723943 to 68723960 17 + TSS region transcription start site region 93893
Tssr93894 10 68751247 to 68751274 27 + TSS region transcription start site region 93894
Tssr93895 10 68780254 to 68780274 20 + TSS region transcription start site region 93895
Gm32931 10 68798901 to 68822824 23923 - lncRNA gene predicted gene, 32931
Tssr93896 10 68808160 to 68808186 26 + TSS region transcription start site region 93896
Tssr98023 10 68822757 to 68822778 21 - TSS region transcription start site region 98023
1700048P04Rik 10 68902803 to 68904500 1697 - lincRNA gene RIKEN cDNA 1700048P04 gene
Gm33035 10 69020740 to 69033888 13148 - lincRNA gene predicted gene, 33035
Gm33130 10 69072348 to 69089880 17532 - lncRNA gene predicted gene, 33130
Cpgi1685 10 69077998 to 69078254 256 CpG island CpG island 1685
Tssr93897 10 69096076 to 69096086 10 + TSS region transcription start site region 93897
Tssr93898 10 69096095 to 69096112 17 + TSS region transcription start site region 93898
Tssr93899 10 69096117 to 69096143 26 + TSS region transcription start site region 93899
Gm47107 10 69096662 to 69097866 1204 - lincRNA gene predicted gene, 47107
Tssr98024 10 69098555 to 69098559 4 - TSS region transcription start site region 98024
Tssr93900 10 69104941 to 69104946 5 + TSS region transcription start site region 93900
Gm40684 10 69112452 to 69117443 4991 + lncRNA gene predicted gene, 40684
Tssr98025 10 69125037 to 69125045 8 - TSS region transcription start site region 98025
Tssr98026 10 69125082 to 69125097 15 - TSS region transcription start site region 98026
Gm24172 10 69132882 to 69132998 116 + snoRNA gene predicted gene, 24172
Gm33263 10 69147745 to 69151100 3355 - lincRNA gene predicted gene, 33263
Tssr93901 10 69151235 to 69151281 46 + TSS region transcription start site region 93901
Tssr93902 10 69151286 to 69151306 20 + TSS region transcription start site region 93902
Tssr93903 10 69151313 to 69151327 14 + TSS region transcription start site region 93903
Tssr93904 10 69151396 to 69151406 10 + TSS region transcription start site region 93904
Tssr93905 10 69151427 to 69151449 22 + TSS region transcription start site region 93905
Rhobtb1 10 69151434 to 69291791 140357 + protein coding gene Rho-related BTB domain containing 1
Tssr98027 10 69166857 to 69166867 10 - TSS region transcription start site region 98027
Tssr93906 10 69171749 to 69171758 9 + TSS region transcription start site region 93906
Tssr93907 10 69192094 to 69192096 2 + TSS region transcription start site region 93907
Tssr93908 10 69208546 to 69208557 11 + TSS region transcription start site region 93908
A930033H14Rik 10 69209762 to 69213098 3336 - protein coding gene RIKEN cDNA A930033H14 gene
Tssr98028 10 69210093 to 69210120 27 - TSS region transcription start site region 98028
Cpgi1686 10 69212542 to 69213879 1337 CpG island CpG island 1686
Tssr93909 10 69212652 to 69212667 15 + TSS region transcription start site region 93909
Tssr93910 10 69212677 to 69212694 17 + TSS region transcription start site region 93910
Tssr98029 10 69212996 to 69213014 18 - TSS region transcription start site region 98029
Tssr98030 10 69213092 to 69213130 38 - TSS region transcription start site region 98030
Tssr93911 10 69213162 to 69213228 66 + TSS region transcription start site region 93911
Tssr93912 10 69213245 to 69213265 20 + TSS region transcription start site region 93912