Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:68225638-68440297

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Arid5b 10 68092523 to 68278726 186203 - protein coding gene AT rich interactive domain 5B (MRF1-like)
Tssr98006 10 68225730 to 68225750 20 - TSS region transcription start site region 98006
Tssr98007 10 68233308 to 68233312 4 - TSS region transcription start site region 98007
Tssr93880 10 68239250 to 68239288 38 + TSS region transcription start site region 93880
Tssr98008 10 68239593 to 68239607 14 - TSS region transcription start site region 98008
Tssr98009 10 68239708 to 68239746 38 - TSS region transcription start site region 98009
Tssr3233 10 68240456 to 68240460 4 - TSS region transcription start site region 3233
Tssr98010 10 68249246 to 68249251 5 - TSS region transcription start site region 98010
Tssr98011 10 68250440 to 68250444 4 - TSS region transcription start site region 98011
D10Mit31 10 68255660 to 68255809 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 31
Ath17 10 68255660 to 68255809 149 QTL atherosclerosis 17
Eae17 10 68255660 to 68255809 149 QTL experimental allergic encephalomyelitis susceptibility 17
Tssr98012 10 68270394 to 68270399 5 - TSS region transcription start site region 98012
Tssr98013 10 68276435 to 68276470 35 - TSS region transcription start site region 98013
Cpgi1680 10 68276486 to 68277400 914 CpG island CpG island 1680
Tssr93881 10 68276560 to 68276584 24 + TSS region transcription start site region 93881
Tssr98014 10 68277315 to 68277328 13 - TSS region transcription start site region 98014
Tssr93882 10 68277464 to 68277514 50 + TSS region transcription start site region 93882
Tssr98015 10 68277517 to 68277529 12 - TSS region transcription start site region 98015
Tssr98016 10 68278713 to 68278735 22 - TSS region transcription start site region 98016
Tssr98017 10 68278828 to 68278867 39 - TSS region transcription start site region 98017
Tssr98018 10 68279163 to 68279178 15 - TSS region transcription start site region 98018
Cpgi1681 10 68283100 to 68283323 223 CpG island CpG island 1681
Gm47078 10 68313008 to 68326978 13970 + lincRNA gene predicted gene, 47078
4930545H06Rik 10 68319071 to 68321142 2071 - lincRNA gene RIKEN cDNA 4930545H06 gene
Tssr98019 10 68321075 to 68321089 14 - TSS region transcription start site region 98019
Gm32748 10 68325638 to 68340297 14659 - lncRNA gene predicted gene, 32748
Tssr98020 10 68358437 to 68358469 32 - TSS region transcription start site region 98020
Gm40683 10 68386587 to 68439789 53202 + lncRNA gene predicted gene, 40683
Cabcoco1 10 68430953 to 68541896 110943 - protein coding gene ciliary associated calcium binding coiled-coil 1