Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:6810904-7612557

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Oprm1 10 6758593 to 7038209 279616 + protein coding gene opioid receptor, mu 1
Tssr92295 10 6851719 to 6851721 2 + TSS region transcription start site region 92295
Ipcef1 10 6885796 to 7052478 166682 - protein coding gene interaction protein for cytohesin exchange factors 1
Tssr96571 10 6916326 to 6916327 1 - TSS region transcription start site region 96571
D10Mit75 10 6918563 to 6918712 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 75
Tssr3123 10 6979595 to 6979615 20 + TSS region transcription start site region 3123
Tssr96572 10 6980065 to 6980068 3 - TSS region transcription start site region 96572
Tssr96573 10 6980296 to 6980320 24 - TSS region transcription start site region 96573
Tssr96574 10 6980346 to 6980355 9 - TSS region transcription start site region 96574
Tssr96575 10 6980389 to 6980398 9 - TSS region transcription start site region 96575
Tssr96576 10 6980445 to 6980490 45 - TSS region transcription start site region 96576
Tssr96577 10 6980499 to 6980508 9 - TSS region transcription start site region 96577
Tssr96578 10 6982942 to 6982965 23 - TSS region transcription start site region 96578
Tssr3124 10 6986531 to 6986552 21 + TSS region transcription start site region 3124
Gm15536 10 7038661 to 7038774 113 + pseudogene predicted gene 15536
Tssr96579 10 7054892 to 7054897 5 - TSS region transcription start site region 96579
Tssr96580 10 7054917 to 7054927 10 - TSS region transcription start site region 96580
Tssr96581 10 7054941 to 7054956 15 - TSS region transcription start site region 96581
Tssr96582 10 7054960 to 7054979 19 - TSS region transcription start site region 96582
Tssr96583 10 7063100 to 7063109 9 - TSS region transcription start site region 96583
Tssr3125 10 7063130 to 7063141 11 - TSS region transcription start site region 3125
Tssr3126 10 7063165 to 7063169 4 - TSS region transcription start site region 3126
Tssr96584 10 7064190 to 7064201 11 - TSS region transcription start site region 96584
Tssr96585 10 7064231 to 7064243 12 - TSS region transcription start site region 96585
Tssr96586 10 7064251 to 7064266 15 - TSS region transcription start site region 96586
Tssr96587 10 7064275 to 7064280 5 - TSS region transcription start site region 96587
Cnksr3 10 7119063 to 7212237 93174 - protein coding gene Cnksr family member 3
Tssr3127 10 7131957 to 7131959 2 + TSS region transcription start site region 3127
Tssr96588 10 7140378 to 7140393 15 - TSS region transcription start site region 96588
Tssr96589 10 7140395 to 7140408 13 - TSS region transcription start site region 96589
Cpgi1254 10 7207268 to 7207432 164 CpG island CpG island 1254
Cpgi1253 10 7210904 to 7212557 1653 CpG island CpG island 1253
Tssr96590 10 7212197 to 7212220 23 - TSS region transcription start site region 96590
Tssr96591 10 7212222 to 7212247 25 - TSS region transcription start site region 96591
Tssr92296 10 7212293 to 7212331 38 + TSS region transcription start site region 92296
Gm46208 10 7212300 to 7215108 2808 + lncRNA gene predicted gene, 46208
Tssr92297 10 7212334 to 7212362 28 + TSS region transcription start site region 92297
Tssr92298 10 7212380 to 7212390 10 + TSS region transcription start site region 92298
Tssr96592 10 7212634 to 7212672 38 - TSS region transcription start site region 96592
Tssr3128 10 7325696 to 7325699 3 + TSS region transcription start site region 3128
Gm21321 10 7390133 to 7392184 2051 - pseudogene predicted gene, 21321
Ulbp1 10 7444873 to 7473640 28767 - protein coding gene UL16 binding protein 1
Tssr3129 10 7458313 to 7458318 5 + TSS region transcription start site region 3129
Gm46209 10 7458356 to 7458908 552 + pseudogene predicted gene, 46209
Tssr3130 10 7473351 to 7473368 17 - TSS region transcription start site region 3130
Tssr3131 10 7473553 to 7473598 45 - TSS region transcription start site region 3131
Tssr3132 10 7473606 to 7473634 28 - TSS region transcription start site region 3132
Gm46196 10 7477962 to 7481919 3957 - pseudogene predicted gene, 46196
Gm40597 10 7491291 to 7584584 93293 - lncRNA gene predicted gene, 40597
Gm48121 10 7577103 to 7577373 270 + pseudogene predicted gene, 48121
Cpgi1272 10 7589398 to 7590876 1478 CpG island CpG island 1272
Tssr92299 10 7589788 to 7589876 88 + TSS region transcription start site region 92299
Lrp11 10 7589800 to 7625483 35683 + protein coding gene low density lipoprotein receptor-related protein 11
Tssr92300 10 7589885 to 7589902 17 + TSS region transcription start site region 92300
Tssr92301 10 7590074 to 7590124 50 + TSS region transcription start site region 92301
Gm16254 10 7606084 to 7606813 729 - pseudogene predicted gene 16254