Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:67997517-68557529

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Rtkn2 10 67979566 to 68046863 67297 + protein coding gene rhotekin 2
Cpgi1677 10 68015787 to 68016049 262 CpG island CpG island 1677
Gm16212 10 68025450 to 68026626 1176 - antisense lncRNA gene predicted gene 16212
Tssr97977 10 68026711 to 68026718 7 - TSS region transcription start site region 97977
Tssr93874 10 68042151 to 68042164 13 + TSS region transcription start site region 93874
Tssr93875 10 68042242 to 68042246 4 + TSS region transcription start site region 93875
Tssr93876 10 68043843 to 68043849 6 + TSS region transcription start site region 93876
Tssr97978 10 68044152 to 68044169 17 - TSS region transcription start site region 97978
Arid5b 10 68092523 to 68278726 186203 - protein coding gene AT rich interactive domain 5B (MRF1-like)
Tssr97979 10 68095926 to 68095959 33 - TSS region transcription start site region 97979
Cpgi1678 10 68097447 to 68097855 408 CpG island CpG island 1678
Tssr97980 10 68097575 to 68097617 42 - TSS region transcription start site region 97980
Tssr97981 10 68098022 to 68098031 9 - TSS region transcription start site region 97981
Tssr97982 10 68102034 to 68102065 31 - TSS region transcription start site region 97982
Tssr97983 10 68102084 to 68102098 14 - TSS region transcription start site region 97983
Tssr97984 10 68106737 to 68106743 6 - TSS region transcription start site region 97984
Tssr97985 10 68116965 to 68116971 6 - TSS region transcription start site region 97985
Tssr97986 10 68119893 to 68119900 7 - TSS region transcription start site region 97986
Tssr97987 10 68126267 to 68126270 3 - TSS region transcription start site region 97987
Tssr97988 10 68127484 to 68127488 4 - TSS region transcription start site region 97988
Tssr97989 10 68135268 to 68135284 16 - TSS region transcription start site region 97989
Tssr97990 10 68135289 to 68135301 12 - TSS region transcription start site region 97990
Cpgi1679 10 68136443 to 68136693 250 CpG island CpG island 1679
Tssr97991 10 68136571 to 68136612 41 - TSS region transcription start site region 97991
Tssr97992 10 68136613 to 68136624 11 - TSS region transcription start site region 97992
Tssr97993 10 68136627 to 68136638 11 - TSS region transcription start site region 97993
Tssr97994 10 68136650 to 68136677 27 - TSS region transcription start site region 97994
Tssr97995 10 68136684 to 68136696 12 - TSS region transcription start site region 97995
Tssr97996 10 68136702 to 68136708 6 - TSS region transcription start site region 97996
Tssr97997 10 68136713 to 68136722 9 - TSS region transcription start site region 97997
Tssr3230 10 68136725 to 68136736 11 - TSS region transcription start site region 3230
Tssr3231 10 68136741 to 68136757 16 - TSS region transcription start site region 3231
Tssr97998 10 68136779 to 68136782 3 - TSS region transcription start site region 97998
Tssr3232 10 68136807 to 68136834 27 - TSS region transcription start site region 3232
Tssr93877 10 68137003 to 68137027 24 + TSS region transcription start site region 93877
Tssr97999 10 68137204 to 68137208 4 - TSS region transcription start site region 97999
Tssr98000 10 68137361 to 68137374 13 - TSS region transcription start site region 98000
Tssr93878 10 68137782 to 68137796 14 + TSS region transcription start site region 93878
Tssr98001 10 68150163 to 68150168 5 - TSS region transcription start site region 98001
Tssr98002 10 68191739 to 68191748 9 - TSS region transcription start site region 98002
Tssr93879 10 68210222 to 68210225 3 + TSS region transcription start site region 93879
Tssr98003 10 68212067 to 68212116 49 - TSS region transcription start site region 98003
D10Mit223 10 68212192 to 68212341 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 223
Tssr98004 10 68212195 to 68212207 12 - TSS region transcription start site region 98004
Tssr98005 10 68218848 to 68218852 4 - TSS region transcription start site region 98005
Tssr98006 10 68225730 to 68225750 20 - TSS region transcription start site region 98006
Tssr98007 10 68233308 to 68233312 4 - TSS region transcription start site region 98007
Tssr93880 10 68239250 to 68239288 38 + TSS region transcription start site region 93880
Tssr98008 10 68239593 to 68239607 14 - TSS region transcription start site region 98008
Tssr98009 10 68239708 to 68239746 38 - TSS region transcription start site region 98009
Tssr3233 10 68240456 to 68240460 4 - TSS region transcription start site region 3233
Tssr98010 10 68249246 to 68249251 5 - TSS region transcription start site region 98010
Tssr98011 10 68250440 to 68250444 4 - TSS region transcription start site region 98011
D10Mit31 10 68255660 to 68255809 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 31
Ath17 10 68255660 to 68255809 149 QTL atherosclerosis 17
Eae17 10 68255660 to 68255809 149 QTL experimental allergic encephalomyelitis susceptibility 17
Tssr98012 10 68270394 to 68270399 5 - TSS region transcription start site region 98012
Tssr98013 10 68276435 to 68276470 35 - TSS region transcription start site region 98013
Cpgi1680 10 68276486 to 68277400 914 CpG island CpG island 1680
Tssr93881 10 68276560 to 68276584 24 + TSS region transcription start site region 93881
Tssr98014 10 68277315 to 68277328 13 - TSS region transcription start site region 98014
Tssr93882 10 68277464 to 68277514 50 + TSS region transcription start site region 93882
Tssr98015 10 68277517 to 68277529 12 - TSS region transcription start site region 98015
Tssr98016 10 68278713 to 68278735 22 - TSS region transcription start site region 98016
Tssr98017 10 68278828 to 68278867 39 - TSS region transcription start site region 98017
Tssr98018 10 68279163 to 68279178 15 - TSS region transcription start site region 98018
Cpgi1681 10 68283100 to 68283323 223 CpG island CpG island 1681
Gm47078 10 68313008 to 68326978 13970 + lincRNA gene predicted gene, 47078
4930545H06Rik 10 68319071 to 68321142 2071 - lincRNA gene RIKEN cDNA 4930545H06 gene
Tssr98019 10 68321075 to 68321089 14 - TSS region transcription start site region 98019
Gm32748 10 68325638 to 68340297 14659 - lncRNA gene predicted gene, 32748
Tssr98020 10 68358437 to 68358469 32 - TSS region transcription start site region 98020
Gm40683 10 68386587 to 68439789 53202 + lncRNA gene predicted gene, 40683
Cabcoco1 10 68430953 to 68541896 110943 - protein coding gene ciliary associated calcium binding coiled-coil 1
Cpgi1682 10 68448113 to 68448380 267 CpG island CpG island 1682
Tssr93883 10 68530095 to 68530101 6 + TSS region transcription start site region 93883
Gm32872 10 68530194 to 68533936 3742 + antisense lncRNA gene predicted gene, 32872
Cpgi1683 10 68541758 to 68542034 276 CpG island CpG island 1683
Tssr98021 10 68541842 to 68541908 66 - TSS region transcription start site region 98021