Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:67993792-69453822

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175 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Rtkn2 10 67979566 to 68046863 67297 + protein coding gene rhotekin 2
Cpgi1677 10 68015787 to 68016049 262 CpG island CpG island 1677
Gm16212 10 68025450 to 68026626 1176 - antisense lncRNA gene predicted gene 16212
Tssr97977 10 68026711 to 68026718 7 - TSS region transcription start site region 97977
Tssr93874 10 68042151 to 68042164 13 + TSS region transcription start site region 93874
Tssr93875 10 68042242 to 68042246 4 + TSS region transcription start site region 93875
Tssr93876 10 68043843 to 68043849 6 + TSS region transcription start site region 93876
Tssr97978 10 68044152 to 68044169 17 - TSS region transcription start site region 97978
Arid5b 10 68092523 to 68278726 186203 - protein coding gene AT rich interactive domain 5B (MRF1-like)
Tssr97979 10 68095926 to 68095959 33 - TSS region transcription start site region 97979
Cpgi1678 10 68097447 to 68097855 408 CpG island CpG island 1678
Tssr97980 10 68097575 to 68097617 42 - TSS region transcription start site region 97980
Tssr97981 10 68098022 to 68098031 9 - TSS region transcription start site region 97981
Tssr97982 10 68102034 to 68102065 31 - TSS region transcription start site region 97982
Tssr97983 10 68102084 to 68102098 14 - TSS region transcription start site region 97983
Tssr97984 10 68106737 to 68106743 6 - TSS region transcription start site region 97984
Tssr97985 10 68116965 to 68116971 6 - TSS region transcription start site region 97985
Tssr97986 10 68119893 to 68119900 7 - TSS region transcription start site region 97986
Tssr97987 10 68126267 to 68126270 3 - TSS region transcription start site region 97987
Tssr97988 10 68127484 to 68127488 4 - TSS region transcription start site region 97988
Tssr97989 10 68135268 to 68135284 16 - TSS region transcription start site region 97989
Tssr97990 10 68135289 to 68135301 12 - TSS region transcription start site region 97990
Cpgi1679 10 68136443 to 68136693 250 CpG island CpG island 1679
Tssr97991 10 68136571 to 68136612 41 - TSS region transcription start site region 97991
Tssr97992 10 68136613 to 68136624 11 - TSS region transcription start site region 97992
Tssr97993 10 68136627 to 68136638 11 - TSS region transcription start site region 97993
Tssr97994 10 68136650 to 68136677 27 - TSS region transcription start site region 97994
Tssr97995 10 68136684 to 68136696 12 - TSS region transcription start site region 97995
Tssr97996 10 68136702 to 68136708 6 - TSS region transcription start site region 97996
Tssr97997 10 68136713 to 68136722 9 - TSS region transcription start site region 97997
Tssr3230 10 68136725 to 68136736 11 - TSS region transcription start site region 3230
Tssr3231 10 68136741 to 68136757 16 - TSS region transcription start site region 3231
Tssr97998 10 68136779 to 68136782 3 - TSS region transcription start site region 97998
Tssr3232 10 68136807 to 68136834 27 - TSS region transcription start site region 3232
Tssr93877 10 68137003 to 68137027 24 + TSS region transcription start site region 93877
Tssr97999 10 68137204 to 68137208 4 - TSS region transcription start site region 97999
Tssr98000 10 68137361 to 68137374 13 - TSS region transcription start site region 98000
Tssr93878 10 68137782 to 68137796 14 + TSS region transcription start site region 93878
Tssr98001 10 68150163 to 68150168 5 - TSS region transcription start site region 98001
Tssr98002 10 68191739 to 68191748 9 - TSS region transcription start site region 98002
Tssr93879 10 68210222 to 68210225 3 + TSS region transcription start site region 93879
Tssr98003 10 68212067 to 68212116 49 - TSS region transcription start site region 98003
D10Mit223 10 68212192 to 68212341 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 223
Tssr98004 10 68212195 to 68212207 12 - TSS region transcription start site region 98004
Tssr98005 10 68218848 to 68218852 4 - TSS region transcription start site region 98005
Tssr98006 10 68225730 to 68225750 20 - TSS region transcription start site region 98006
Tssr98007 10 68233308 to 68233312 4 - TSS region transcription start site region 98007
Tssr93880 10 68239250 to 68239288 38 + TSS region transcription start site region 93880
Tssr98008 10 68239593 to 68239607 14 - TSS region transcription start site region 98008
Tssr98009 10 68239708 to 68239746 38 - TSS region transcription start site region 98009
Tssr3233 10 68240456 to 68240460 4 - TSS region transcription start site region 3233
Tssr98010 10 68249246 to 68249251 5 - TSS region transcription start site region 98010
Tssr98011 10 68250440 to 68250444 4 - TSS region transcription start site region 98011
Ath17 10 68255660 to 68255809 149 QTL atherosclerosis 17
D10Mit31 10 68255660 to 68255809 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 31
Eae17 10 68255660 to 68255809 149 QTL experimental allergic encephalomyelitis susceptibility 17
Tssr98012 10 68270394 to 68270399 5 - TSS region transcription start site region 98012
Tssr98013 10 68276435 to 68276470 35 - TSS region transcription start site region 98013
Cpgi1680 10 68276486 to 68277400 914 CpG island CpG island 1680
Tssr93881 10 68276560 to 68276584 24 + TSS region transcription start site region 93881
Tssr98014 10 68277315 to 68277328 13 - TSS region transcription start site region 98014
Tssr93882 10 68277464 to 68277514 50 + TSS region transcription start site region 93882
Tssr98015 10 68277517 to 68277529 12 - TSS region transcription start site region 98015
Tssr98016 10 68278713 to 68278735 22 - TSS region transcription start site region 98016
Tssr98017 10 68278828 to 68278867 39 - TSS region transcription start site region 98017
Tssr98018 10 68279163 to 68279178 15 - TSS region transcription start site region 98018
Cpgi1681 10 68283100 to 68283323 223 CpG island CpG island 1681
Gm47078 10 68313008 to 68326978 13970 + lincRNA gene predicted gene, 47078
4930545H06Rik 10 68319071 to 68321142 2071 - lincRNA gene RIKEN cDNA 4930545H06 gene
Tssr98019 10 68321075 to 68321089 14 - TSS region transcription start site region 98019
Gm32748 10 68325638 to 68340297 14659 - lncRNA gene predicted gene, 32748
Tssr98020 10 68358437 to 68358469 32 - TSS region transcription start site region 98020
Gm40683 10 68386587 to 68439789 53202 + lncRNA gene predicted gene, 40683
Cabcoco1 10 68430953 to 68541896 110943 - protein coding gene ciliary associated calcium binding coiled-coil 1
Cpgi1682 10 68448113 to 68448380 267 CpG island CpG island 1682
Tssr93883 10 68530095 to 68530101 6 + TSS region transcription start site region 93883
Gm32872 10 68530194 to 68533936 3742 + antisense lncRNA gene predicted gene, 32872
Cpgi1683 10 68541758 to 68542034 276 CpG island CpG island 1683
Tssr98021 10 68541842 to 68541908 66 - TSS region transcription start site region 98021
Tssr98022 10 68673629 to 68673650 21 - TSS region transcription start site region 98022
Gm7594 10 68691515 to 68692375 860 - pseudogene predicted gene 7594
Tssr93884 10 68723634 to 68723650 16 + TSS region transcription start site region 93884
Cpgi1684 10 68723701 to 68724513 812 CpG island CpG island 1684
Tssr93885 10 68723723 to 68723760 37 + TSS region transcription start site region 93885
Tmem26 10 68723746 to 68782655 58909 + protein coding gene transmembrane protein 26
Tssr93886 10 68723761 to 68723786 25 + TSS region transcription start site region 93886
Tssr93887 10 68723792 to 68723822 30 + TSS region transcription start site region 93887
Tssr93888 10 68723827 to 68723841 14 + TSS region transcription start site region 93888
Tssr93889 10 68723858 to 68723865 7 + TSS region transcription start site region 93889
Tssr93890 10 68723878 to 68723889 11 + TSS region transcription start site region 93890
Tssr93891 10 68723891 to 68723902 11 + TSS region transcription start site region 93891
Tssr93892 10 68723915 to 68723931 16 + TSS region transcription start site region 93892
Tssr93893 10 68723943 to 68723960 17 + TSS region transcription start site region 93893
Tssr93894 10 68751247 to 68751274 27 + TSS region transcription start site region 93894
Tssr93895 10 68780254 to 68780274 20 + TSS region transcription start site region 93895
Gm32931 10 68798901 to 68822824 23923 - lncRNA gene predicted gene, 32931
Tssr93896 10 68808160 to 68808186 26 + TSS region transcription start site region 93896
Tssr98023 10 68822757 to 68822778 21 - TSS region transcription start site region 98023
1700048P04Rik 10 68902803 to 68904500 1697 - lincRNA gene RIKEN cDNA 1700048P04 gene
Gm33035 10 69020740 to 69033888 13148 - lincRNA gene predicted gene, 33035
Gm33130 10 69072348 to 69089880 17532 - lncRNA gene predicted gene, 33130
Cpgi1685 10 69077998 to 69078254 256 CpG island CpG island 1685
Tssr93897 10 69096076 to 69096086 10 + TSS region transcription start site region 93897
Tssr93898 10 69096095 to 69096112 17 + TSS region transcription start site region 93898
Tssr93899 10 69096117 to 69096143 26 + TSS region transcription start site region 93899
Gm47107 10 69096662 to 69097866 1204 - lincRNA gene predicted gene, 47107
Tssr98024 10 69098555 to 69098559 4 - TSS region transcription start site region 98024
Tssr93900 10 69104941 to 69104946 5 + TSS region transcription start site region 93900
Gm40684 10 69112452 to 69117443 4991 + lncRNA gene predicted gene, 40684
Tssr98025 10 69125037 to 69125045 8 - TSS region transcription start site region 98025
Tssr98026 10 69125082 to 69125097 15 - TSS region transcription start site region 98026
Gm24172 10 69132882 to 69132998 116 + snoRNA gene predicted gene, 24172
Gm33263 10 69147745 to 69151100 3355 - lincRNA gene predicted gene, 33263
Tssr93901 10 69151235 to 69151281 46 + TSS region transcription start site region 93901
Tssr93902 10 69151286 to 69151306 20 + TSS region transcription start site region 93902
Tssr93903 10 69151313 to 69151327 14 + TSS region transcription start site region 93903
Tssr93904 10 69151396 to 69151406 10 + TSS region transcription start site region 93904
Tssr93905 10 69151427 to 69151449 22 + TSS region transcription start site region 93905
Rhobtb1 10 69151434 to 69291791 140357 + protein coding gene Rho-related BTB domain containing 1
Tssr98027 10 69166857 to 69166867 10 - TSS region transcription start site region 98027
Tssr93906 10 69171749 to 69171758 9 + TSS region transcription start site region 93906
Tssr93907 10 69192094 to 69192096 2 + TSS region transcription start site region 93907
Tssr93908 10 69208546 to 69208557 11 + TSS region transcription start site region 93908
A930033H14Rik 10 69209762 to 69213098 3336 - protein coding gene RIKEN cDNA A930033H14 gene
Tssr98028 10 69210093 to 69210120 27 - TSS region transcription start site region 98028
Cpgi1686 10 69212542 to 69213879 1337 CpG island CpG island 1686
Tssr93909 10 69212652 to 69212667 15 + TSS region transcription start site region 93909
Tssr93910 10 69212677 to 69212694 17 + TSS region transcription start site region 93910
Tssr98029 10 69212996 to 69213014 18 - TSS region transcription start site region 98029
Tssr98030 10 69213092 to 69213130 38 - TSS region transcription start site region 98030
Tssr93911 10 69213162 to 69213228 66 + TSS region transcription start site region 93911
Tssr93912 10 69213245 to 69213265 20 + TSS region transcription start site region 93912
Tssr93913 10 69219328 to 69219346 18 + TSS region transcription start site region 93913
Tssr93914 10 69219357 to 69219382 25 + TSS region transcription start site region 93914
Tssr93915 10 69219389 to 69219405 16 + TSS region transcription start site region 93915
Tssr93916 10 69219419 to 69219436 17 + TSS region transcription start site region 93916
Tssr93917 10 69219447 to 69219455 8 + TSS region transcription start site region 93917
Tssr93918 10 69236377 to 69236379 2 + TSS region transcription start site region 93918
Tssr93919 10 69246992 to 69247004 12 + TSS region transcription start site region 93919
Tssr93920 10 69248651 to 69248656 5 + TSS region transcription start site region 93920
Cpgi1687 10 69266111 to 69266321 210 CpG island CpG island 1687
Cpgi1688 10 69269945 to 69270513 568 CpG island CpG island 1688
Tssr3234 10 69275186 to 69275190 4 - TSS region transcription start site region 3234
Tssr93921 10 69280040 to 69280041 1 + TSS region transcription start site region 93921
Cpgi1689 10 69311999 to 69312315 316 CpG island CpG island 1689
Gm40685 10 69312139 to 69315376 3237 + lincRNA gene predicted gene, 40685
Tssr93922 10 69325202 to 69325214 12 + TSS region transcription start site region 93922
Rpl30-ps7 10 69325203 to 69325669 466 + pseudogene ribosomal protein L30, pseudogene 7
4930423B08Rik 10 69326355 to 69328207 1852 - lncRNA gene RIKEN cDNA 4930423B08 gene
Tssr98031 10 69328152 to 69328161 9 - TSS region transcription start site region 98031
Tssr93923 10 69328265 to 69328273 8 + TSS region transcription start site region 93923
Cdk1 10 69336635 to 69352912 16277 - protein coding gene cyclin-dependent kinase 1
Cpgi1690 10 69352043 to 69352452 409 CpG island CpG island 1690
Cpgi1691 10 69352640 to 69353231 591 CpG island CpG island 1691
Tssr98032 10 69352868 to 69352881 13 - TSS region transcription start site region 98032
Tssr98033 10 69352886 to 69352929 43 - TSS region transcription start site region 98033
Gm47211 10 69372689 to 69373312 623 - pseudogene predicted gene, 47211
4833431D13Rik 10 69396956 to 69602137 205181 unclassified non-coding RNA gene RIKEN cDNA 4833431D13 gene
Cpgi1692 10 69398394 to 69399919 1525 CpG island CpG island 1692
Tssr93924 10 69398724 to 69398740 16 + TSS region transcription start site region 93924
Tssr93925 10 69398751 to 69398765 14 + TSS region transcription start site region 93925
Tssr93926 10 69398770 to 69398788 18 + TSS region transcription start site region 93926
Tssr93927 10 69398799 to 69398817 18 + TSS region transcription start site region 93927
Tssr93928 10 69398846 to 69398892 46 + TSS region transcription start site region 93928
Tssr93929 10 69398900 to 69398921 21 + TSS region transcription start site region 93929
Tssr93930 10 69398923 to 69398949 26 + TSS region transcription start site region 93930
Tssr93931 10 69398950 to 69398977 27 + TSS region transcription start site region 93931
Tssr93932 10 69398980 to 69398993 13 + TSS region transcription start site region 93932
Tssr93933 10 69399003 to 69399011 8 + TSS region transcription start site region 93933
Tssr93934 10 69399020 to 69399041 21 + TSS region transcription start site region 93934
D10Jor1 10 69410942 to 69411223 281 DNA segment DNA segment, Chr 10, Barbara Jordan 1
Tssr93935 10 69417564 to 69417583 19 + TSS region transcription start site region 93935
Gm18636 10 69422683 to 69423748 1065 - pseudogene predicted gene, 18636
A930011B18Rik 10 69439004 to 69439739 735 unclassified gene RIKEN cDNA A930011B18 gene