Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:67552935-68042937

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr93853 10 67554576 to 67554581 5 + TSS region transcription start site region 93853
4930563J15Rik 10 67568522 to 67571989 3467 - lincRNA gene RIKEN cDNA 4930563J15 gene
Tssr97962 10 67570003 to 67570052 49 - TSS region transcription start site region 97962
Tssr97963 10 67571938 to 67571944 6 - TSS region transcription start site region 97963
Tssr97964 10 67571946 to 67571969 23 - TSS region transcription start site region 97964
Tssr97965 10 67571980 to 67571989 9 - TSS region transcription start site region 97965
Gm10797 10 67572042 to 67574263 2221 + protein coding gene predicted gene 10797
Tssr93854 10 67572060 to 67572076 16 + TSS region transcription start site region 93854
Gm32364 10 67575883 to 67586387 10504 + lincRNA gene predicted gene, 32364
Tssr97966 10 67585962 to 67585969 7 - TSS region transcription start site region 97966
Tssr97967 10 67596662 to 67596710 48 - TSS region transcription start site region 97967
Tssr97968 10 67598459 to 67598496 37 - TSS region transcription start site region 97968
D10Mit222 10 67601657 to 67601770 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 222
Tssr93855 10 67644439 to 67644450 11 + TSS region transcription start site region 93855
Tssr93856 10 67646938 to 67646954 16 + TSS region transcription start site region 93856
Tssr93857 10 67647233 to 67647241 8 + TSS region transcription start site region 93857
Tssr93858 10 67647409 to 67647422 13 + TSS region transcription start site region 93858
Tssr93859 10 67647435 to 67647447 12 + TSS region transcription start site region 93859
Tssr97969 10 67647478 to 67647485 7 - TSS region transcription start site region 97969
Tssr97970 10 67648320 to 67648324 4 - TSS region transcription start site region 97970
Gm32515 10 67665359 to 67666745 1386 + lincRNA gene predicted gene, 32515
Gm32438 10 67693520 to 67703923 10403 + lncRNA gene predicted gene, 32438
Tssr93860 10 67693878 to 67693893 15 + TSS region transcription start site region 93860
Tssr97971 10 67695929 to 67695959 30 - TSS region transcription start site region 97971
Tssr93861 10 67703023 to 67703046 23 + TSS region transcription start site region 93861
Tssr93862 10 67703365 to 67703375 10 + TSS region transcription start site region 93862
Gm40680 10 67705230 to 67710641 5411 + lncRNA gene predicted gene, 40680
Gm47574 10 67707838 to 67709468 1630 + unclassified gene predicted gene, 47574
1700030E10Rik 10 67708588 to 67718039 9451 - lincRNA gene RIKEN cDNA 1700030E10 gene
Tssr3229 10 67713299 to 67713320 21 + TSS region transcription start site region 3229
D10Mit62 10 67713375 to 67713542 167 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 62
D10Mit197 10 67715398 to 67715515 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 197
Gm40681 10 67749152 to 67778382 29230 - lncRNA gene predicted gene, 40681
4930543I11Rik 10 67785735 to 67786693 958 + lncRNA gene RIKEN cDNA 4930543I11 gene
Tssr93863 10 67785743 to 67785755 12 + TSS region transcription start site region 93863
Gm49766 10 67785749 to 67836401 50652 + lincRNA gene predicted gene, 49766
Gm29774 10 67792767 to 67793202 435 - pseudogene predicted gene, 29774
Tssr93864 10 67797935 to 67797937 2 + TSS region transcription start site region 93864
D10Mit63.2 10 67803351 to 67803464 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 63.2
D10Mit63 10 67803402 to 67803541 139 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 63
Cpgi1672 10 67836346 to 67836523 177 CpG island CpG island 1672
Zfp365 10 67886105 to 67912662 26557 - protein coding gene zinc finger protein 365
Tssr97972 10 67901263 to 67901270 7 - TSS region transcription start site region 97972
Cpgi1673 10 67909212 to 67909804 592 CpG island CpG island 1673
Tssr93865 10 67909219 to 67909245 26 + TSS region transcription start site region 93865
Tssr93866 10 67909246 to 67909262 16 + TSS region transcription start site region 93866
Tssr93867 10 67910059 to 67910061 2 + TSS region transcription start site region 93867
Cpgi1674 10 67911893 to 67912841 948 CpG island CpG island 1674
Tssr97973 10 67912398 to 67912460 62 - TSS region transcription start site region 97973
Tssr97974 10 67912475 to 67912492 17 - TSS region transcription start site region 97974
Tssr97975 10 67912594 to 67912617 23 - TSS region transcription start site region 97975
Tssr97976 10 67912620 to 67912685 65 - TSS region transcription start site region 97976
Cpgi1675 10 67920648 to 67921263 615 CpG island CpG island 1675
D10Mit274 10 67950779 to 67950919 140 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-274
4930521O17Rik 10 67962479 to 67973708 11229 - lincRNA gene RIKEN cDNA 4930521O17 gene
Cpgi1676 10 67979490 to 67980143 653 CpG island CpG island 1676
Rtkn2 10 67979566 to 68046863 67297 + protein coding gene rhotekin 2
Tssr93868 10 67979569 to 67979575 6 + TSS region transcription start site region 93868
Tssr93869 10 67979592 to 67979609 17 + TSS region transcription start site region 93869
Tssr93870 10 67979649 to 67979660 11 + TSS region transcription start site region 93870
Tssr93871 10 67979709 to 67979720 11 + TSS region transcription start site region 93871
Tssr93872 10 67979737 to 67979760 23 + TSS region transcription start site region 93872
Tssr93873 10 67981794 to 67981797 3 + TSS region transcription start site region 93873
Cpgi1677 10 68015787 to 68016049 262 CpG island CpG island 1677
Gm16212 10 68025450 to 68026626 1176 - antisense lncRNA gene predicted gene 16212
Tssr97977 10 68026711 to 68026718 7 - TSS region transcription start site region 97977
Tssr93874 10 68042151 to 68042164 13 + TSS region transcription start site region 93874
Tssr93875 10 68042242 to 68042246 4 + TSS region transcription start site region 93875