Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:67250883-67911387

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116 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jmjd1c 10 67096327 to 67256326 159999 + protein coding gene jumonji domain containing 1C
Tssr93824 10 67254645 to 67254650 5 + TSS region transcription start site region 93824
Nrbf2 10 67266689 to 67285305 18616 - protein coding gene nuclear receptor binding factor 2
Cpgi1666 10 67284601 to 67285803 1202 CpG island CpG island 1666
Tssr97946 10 67285248 to 67285316 68 - TSS region transcription start site region 97946
Gm46200 10 67285433 to 67293160 7727 + lncRNA gene predicted gene, 46200
Tssr93825 10 67285449 to 67285470 21 + TSS region transcription start site region 93825
Tssr93826 10 67285475 to 67285513 38 + TSS region transcription start site region 93826
Tssr93827 10 67285537 to 67285551 14 + TSS region transcription start site region 93827
Gm49454 10 67297406 to 67418927 121521 + lincRNA gene predicted gene, 49454
Gm46229 10 67304402 to 67313629 9227 + lncRNA gene predicted gene, 46229
Gm47516 10 67348803 to 67348962 159 - pseudogene predicted gene, 47516
Gm46230 10 67349979 to 67397213 47234 + lncRNA gene predicted gene, 46230
Gm31962 10 67399678 to 67419288 19610 + lncRNA gene predicted gene, 31962
Gm32023 10 67423994 to 67425251 1257 + lincRNA gene predicted gene, 32023
Gm47531 10 67436090 to 67443429 7339 - lincRNA gene predicted gene, 47531
Cpgi1667 10 67458729 to 67459008 279 CpG island CpG island 1667
4930403L11Rik 10 67484387 to 67486050 1663 unclassified gene RIKEN cDNA 4930403L11 gene
Gm32255 10 67496359 to 67497707 1348 - lincRNA gene predicted gene, 32255
Gm40679 10 67501139 to 67503142 2003 - lncRNA gene predicted gene, 40679
D10Mit113 10 67507710 to 67507833 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 113
Gm32176 10 67509125 to 67511539 2414 + lncRNA gene predicted gene, 32176
Tssr93828 10 67528369 to 67528398 29 + TSS region transcription start site region 93828
Tssr93829 10 67534512 to 67534525 13 + TSS region transcription start site region 93829
Cpgi1668 10 67535017 to 67537076 2059 CpG island CpG island 1668
Tssr97947 10 67535332 to 67535350 18 - TSS region transcription start site region 97947
Tssr93830 10 67535465 to 67535492 27 + TSS region transcription start site region 93830
Egr2 10 67535475 to 67542188 6713 + protein coding gene early growth response 2
Tssr93831 10 67535493 to 67535515 22 + TSS region transcription start site region 93831
Tssr97948 10 67535544 to 67535549 5 - TSS region transcription start site region 97948
Tssr93832 10 67535663 to 67535673 10 + TSS region transcription start site region 93832
Tssr97949 10 67536779 to 67536803 24 - TSS region transcription start site region 97949
Tssr97950 10 67537154 to 67537158 4 - TSS region transcription start site region 97950
Tssr93833 10 67537209 to 67537213 4 + TSS region transcription start site region 93833
Tssr97951 10 67537385 to 67537396 11 - TSS region transcription start site region 97951
Cpgi1669 10 67537466 to 67537929 463 CpG island CpG island 1669
Tssr97952 10 67537699 to 67537711 12 - TSS region transcription start site region 97952
Tssr93834 10 67537861 to 67537877 16 + TSS region transcription start site region 93834
Tssr93835 10 67538063 to 67538074 11 + TSS region transcription start site region 93835
Cpgi1670 10 67538170 to 67539219 1049 CpG island CpG island 1670
Tssr93836 10 67538186 to 67538195 9 + TSS region transcription start site region 93836
Tssr93837 10 67538299 to 67538309 10 + TSS region transcription start site region 93837
Tssr93838 10 67538463 to 67538499 36 + TSS region transcription start site region 93838
Tssr93839 10 67538563 to 67538569 6 + TSS region transcription start site region 93839
Tssr97953 10 67539162 to 67539172 10 - TSS region transcription start site region 97953
Tssr93840 10 67539250 to 67539263 13 + TSS region transcription start site region 93840
Tssr93841 10 67539798 to 67539809 11 + TSS region transcription start site region 93841
Tssr93842 10 67539853 to 67539878 25 + TSS region transcription start site region 93842
Tssr93843 10 67539938 to 67539952 14 + TSS region transcription start site region 93843
Tssr93844 10 67539974 to 67540001 27 + TSS region transcription start site region 93844
Tssr93845 10 67540016 to 67540041 25 + TSS region transcription start site region 93845
Tssr93846 10 67540047 to 67540089 42 + TSS region transcription start site region 93846
Tssr97954 10 67540137 to 67540173 36 - TSS region transcription start site region 97954
Tssr93847 10 67540747 to 67540751 4 + TSS region transcription start site region 93847
Ado 10 67544511 to 67548955 4444 - protein coding gene 2-aminoethanethiol (cysteamine) dioxygenase
Tssr97955 10 67547493 to 67547499 6 - TSS region transcription start site region 97955
Tssr97956 10 67547768 to 67547796 28 - TSS region transcription start site region 97956
Cpgi1671 10 67547788 to 67549704 1916 CpG island CpG island 1671
Tssr93848 10 67547822 to 67547838 16 + TSS region transcription start site region 93848
Tssr93849 10 67547865 to 67547885 20 + TSS region transcription start site region 93849
Tssr93850 10 67547939 to 67547959 20 + TSS region transcription start site region 93850
Tssr93851 10 67547960 to 67547985 25 + TSS region transcription start site region 93851
Tssr93852 10 67548225 to 67548236 11 + TSS region transcription start site region 93852
Tssr97957 10 67548742 to 67548793 51 - TSS region transcription start site region 97957
Tssr97958 10 67548944 to 67549001 57 - TSS region transcription start site region 97958
Tssr3228 10 67549010 to 67549022 12 - TSS region transcription start site region 3228
Tssr97959 10 67549036 to 67549047 11 - TSS region transcription start site region 97959
Tssr97960 10 67549077 to 67549094 17 - TSS region transcription start site region 97960
Tssr97961 10 67549101 to 67549149 48 - TSS region transcription start site region 97961
Tssr93853 10 67554576 to 67554581 5 + TSS region transcription start site region 93853
4930563J15Rik 10 67568522 to 67571989 3467 - lincRNA gene RIKEN cDNA 4930563J15 gene
Tssr97962 10 67570003 to 67570052 49 - TSS region transcription start site region 97962
Tssr97963 10 67571938 to 67571944 6 - TSS region transcription start site region 97963
Tssr97964 10 67571946 to 67571969 23 - TSS region transcription start site region 97964
Tssr97965 10 67571980 to 67571989 9 - TSS region transcription start site region 97965
Gm10797 10 67572042 to 67574263 2221 + protein coding gene predicted gene 10797
Tssr93854 10 67572060 to 67572076 16 + TSS region transcription start site region 93854
Gm32364 10 67575883 to 67586387 10504 + lincRNA gene predicted gene, 32364
Tssr97966 10 67585962 to 67585969 7 - TSS region transcription start site region 97966
Tssr97967 10 67596662 to 67596710 48 - TSS region transcription start site region 97967
Tssr97968 10 67598459 to 67598496 37 - TSS region transcription start site region 97968
D10Mit222 10 67601657 to 67601770 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 222
Tssr93855 10 67644439 to 67644450 11 + TSS region transcription start site region 93855
Tssr93856 10 67646938 to 67646954 16 + TSS region transcription start site region 93856
Tssr93857 10 67647233 to 67647241 8 + TSS region transcription start site region 93857
Tssr93858 10 67647409 to 67647422 13 + TSS region transcription start site region 93858
Tssr93859 10 67647435 to 67647447 12 + TSS region transcription start site region 93859
Tssr97969 10 67647478 to 67647485 7 - TSS region transcription start site region 97969
Tssr97970 10 67648320 to 67648324 4 - TSS region transcription start site region 97970
Gm32515 10 67665359 to 67666745 1386 + lincRNA gene predicted gene, 32515
Gm32438 10 67693520 to 67703923 10403 + lncRNA gene predicted gene, 32438
Tssr93860 10 67693878 to 67693893 15 + TSS region transcription start site region 93860
Tssr97971 10 67695929 to 67695959 30 - TSS region transcription start site region 97971
Tssr93861 10 67703023 to 67703046 23 + TSS region transcription start site region 93861
Tssr93862 10 67703365 to 67703375 10 + TSS region transcription start site region 93862
Gm40680 10 67705230 to 67710641 5411 + lncRNA gene predicted gene, 40680
Gm47574 10 67707838 to 67709468 1630 + unclassified gene predicted gene, 47574
1700030E10Rik 10 67708588 to 67718039 9451 - lincRNA gene RIKEN cDNA 1700030E10 gene
Tssr3229 10 67713299 to 67713320 21 + TSS region transcription start site region 3229
D10Mit62 10 67713375 to 67713542 167 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 62
D10Mit197 10 67715398 to 67715515 117 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 197
Gm40681 10 67749152 to 67778382 29230 - lncRNA gene predicted gene, 40681
4930543I11Rik 10 67785735 to 67786693 958 + lncRNA gene RIKEN cDNA 4930543I11 gene
Tssr93863 10 67785743 to 67785755 12 + TSS region transcription start site region 93863
Gm49766 10 67785749 to 67836401 50652 + lincRNA gene predicted gene, 49766
Gm29774 10 67792767 to 67793202 435 - pseudogene predicted gene, 29774
Tssr93864 10 67797935 to 67797937 2 + TSS region transcription start site region 93864
D10Mit63.2 10 67803351 to 67803464 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 63.2
D10Mit63 10 67803402 to 67803541 139 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 63
Cpgi1672 10 67836346 to 67836523 177 CpG island CpG island 1672
Zfp365 10 67886105 to 67912662 26557 - protein coding gene zinc finger protein 365
Tssr97972 10 67901263 to 67901270 7 - TSS region transcription start site region 97972
Cpgi1673 10 67909212 to 67909804 592 CpG island CpG island 1673
Tssr93865 10 67909219 to 67909245 26 + TSS region transcription start site region 93865
Tssr93866 10 67909246 to 67909262 16 + TSS region transcription start site region 93866
Tssr93867 10 67910059 to 67910061 2 + TSS region transcription start site region 93867